RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 RAB27BO00194 218 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 TOR1AO14656 332 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 SPINT2O43291 252 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 RCC1P18754 421 aaPredicted RBP13.53□□□□□ -0.24
CLK3-207ENST00000562389 HTR1DP28221 377 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 PRRX1P54821 245 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 LOXL3P58215 753 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 LSM3P62310 102 aaKnown RBP13.53□□□□□ -0.24
CLK3-207ENST00000562389 LTC4SQ16873 150 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 MOGAT2Q3SYC2 334 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 Q3ZCU0 254 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 PLAC9Q5JTB6 97 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 UTF1Q5T230 341 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 ZNF880Q6PDB4 577 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 DYNAPQ8N1N2 210 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 OR10R2Q8NGX6 335 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 NDNFQ8TB73 568 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 CREB3L1Q96BA8 519 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 SSX3Q99909 188 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 MMP28Q9H239 520 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 TNFRSF19Q9NS68 423 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 GFOD1Q9NXC2 390 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 KCNIP1Q9NZI2 227 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 FBN1P35555 2871 aaKnown RBP13.53□□□□□ -0.24
CLK3-207ENST00000562389 POM121CA8CG34 1229 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 J3QR06 171 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 SDCBPO00560 298 aaPredicted RBP13.52□□□□□ -0.25
CLK3-207ENST00000562389 HBZP02008 142 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 TFAP2AP05549 437 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 SNRPBP14678 240 aaKnown RBP13.52□□□□□ -0.25
CLK3-207ENST00000562389 PAX6P26367 422 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 ALDH3B2P48448 385 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 RPL15P61313 204 aaKnown RBP13.52□□□□□ -0.25
CLK3-207ENST00000562389 ACTG1P63261 375 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 SSX2Q16385 188 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 IDNKQ5T6J7 187 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 MOB1BQ7L9L4 216 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 ANKRD13BQ86YJ7 626 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 CROCCP3Q8IVE0 287 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 UBALD1Q8TB05 177 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 LGALS14Q8TCE9 139 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 RAB3CQ96E17 227 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 TAF9BQ9HBM6 251 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 CHMP1AQ9HD42 196 aaPredicted RBP13.52□□□□□ -0.25
CLK3-207ENST00000562389 DPM3Q9P2X0 92 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 VPREB3Q9UKI3 123 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 PSG11Q9UQ72 335 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 ETV7Q9Y603 341 aa13.52□□□□□ -0.25
CLK3-207ENST00000562389 TMEM89A2RUT3 159 aa13.51□□□□□ -0.25
CLK3-207ENST00000562389 LEUTXA8MZ59 168 aa13.51□□□□□ -0.25
CLK3-207ENST00000562389 BUB1B-PAK6H3BSN5 160 aa13.51□□□□□ -0.25
CLK3-207ENST00000562389 H3BUX3 64 aa13.51□□□□□ -0.25
CLK3-207ENST00000562389 GABARAPO95166 117 aa13.51□□□□□ -0.25
CLK3-207ENST00000562389 HKR1P10072 659 aa13.51□□□□□ -0.25
CLK3-207ENST00000562389 HMGN3Q15651 99 aa13.51□□□□□ -0.25
CLK3-207ENST00000562389 Q6ZPA2 131 aa13.51□□□□□ -0.25
CLK3-207ENST00000562389 C8orf31Q8N9H6 132 aa13.51□□□□□ -0.25
CLK3-207ENST00000562389 OR1L1Q8NH94 360 aa13.51□□□□□ -0.25
CLK3-207ENST00000562389 LEAP2Q969E1 77 aa13.51□□□□□ -0.25
CLK3-207ENST00000562389 CMSS1Q9BQ75 279 aaKnown RBP13.51□□□□□ -0.25
CLK3-207ENST00000562389 ATG5Q9H1Y0 275 aa13.51□□□□□ -0.25
CLK3-207ENST00000562389 C12orf4Q9NQ89 552 aa13.51□□□□□ -0.25
CLK3-207ENST00000562389 MGAT4AQ9UM21 535 aa13.51□□□□□ -0.25
CLK3-207ENST00000562389 KCNK7Q9Y2U2 307 aa13.51□□□□□ -0.25
CLK3-207ENST00000562389 AMMECR1Q9Y4X0 333 aaPredicted RBP13.51□□□□□ -0.25
CLK3-207ENST00000562389 IGHV3-43A0A0B4J1X8 118 aa13.5□□□□□ -0.25
CLK3-207ENST00000562389 FAM181BA6NEQ2 426 aa13.5□□□□□ -0.25
CLK3-207ENST00000562389 LY6LH3BQJ8 138 aa13.5□□□□□ -0.25
CLK3-207ENST00000562389 MFNGO00587 321 aa13.5□□□□□ -0.25
CLK3-207ENST00000562389 SCGNO76038 276 aa13.5□□□□□ -0.25
CLK3-207ENST00000562389 IGHV3-7P01780 117 aa13.5□□□□□ -0.25
CLK3-207ENST00000562389 IGHV3-43DP0DP04 118 aa13.5□□□□□ -0.25
CLK3-207ENST00000562389 HIST1H1DP16402 221 aaKnown RBP13.5□□□□□ -0.25
CLK3-207ENST00000562389 RPS19P39019 145 aaKnown RBP13.5□□□□□ -0.25
CLK3-207ENST00000562389 CEACAM3P40198 252 aa13.5□□□□□ -0.25
CLK3-207ENST00000562389 GNG10P50151 68 aa13.5□□□□□ -0.25
CLK3-207ENST00000562389 DYNLT3P51808 116 aa13.5□□□□□ -0.25
CLK3-207ENST00000562389 NCS1P62166 190 aa13.5□□□□□ -0.25
CLK3-207ENST00000562389 GPR141Q7Z602 305 aa13.5□□□□□ -0.25
CLK3-207ENST00000562389 PRR18Q8N4B5 295 aa13.5□□□□□ -0.25
CLK3-207ENST00000562389 LINC00311Q8N616 119 aa13.5□□□□□ -0.25
CLK3-207ENST00000562389 SPATA3Q8NHX4 192 aa13.5□□□□□ -0.25
CLK3-207ENST00000562389 HDHD3Q9BSH5 251 aaPredicted RBP13.5□□□□□ -0.25
CLK3-207ENST00000562389 HILPDAQ9Y5L2 63 aa13.5□□□□□ -0.25
CLK3-207ENST00000562389 SERPINE3A8MV23 424 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 OOSP1A8MZH6 123 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 GPR137BO60478 399 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 SERPINB10P48595 397 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 VBP1P61758 197 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 HTD2P86397 168 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 ARL6IP1Q15041 203 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 TPTE2P1Q5T6R2 138 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 OLFML2AQ68BL7 652 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 OR5H6Q8NGV6 325 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 PIFOQ8TCI5 191 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 GCDHQ92947 438 aaPredicted RBP13.49□□□□□ -0.25
CLK3-207ENST00000562389 SLC25A46Q96AG3 418 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 GALMQ96C23 342 aa13.49□□□□□ -0.25
CLK3-207ENST00000562389 NAA50Q9GZZ1 169 aaKnown RBP13.49□□□□□ -0.25
CLK3-207ENST00000562389 Q9N2K0 584 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms