RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 VSNL1P62760 191 aa1.33□□□□□ -2.2
USP8-218ENST00000561330 Q6ZT83 130 aa1.33□□□□□ -2.2
USP8-218ENST00000561330 OR9I1Q8NGQ6 314 aa1.33□□□□□ -2.2
USP8-218ENST00000561330 OR4X1Q8NH49 305 aa1.33□□□□□ -2.2
USP8-218ENST00000561330 TMBIM1Q969X1 311 aa1.33□□□□□ -2.2
USP8-218ENST00000561330 PGLYRP3Q96LB9 341 aa1.33□□□□□ -2.2
USP8-218ENST00000561330 NAP1L5Q96NT1 182 aaPredicted RBP1.33□□□□□ -2.2
USP8-218ENST00000561330 PRSS27Q9BQR3 290 aa1.33□□□□□ -2.2
USP8-218ENST00000561330 FAAP24Q9BTP7 215 aa1.33□□□□□ -2.2
USP8-218ENST00000561330 SMDT1Q9H4I9 107 aa1.33□□□□□ -2.2
USP8-218ENST00000561330 HAUS4Q9H6D7 363 aa1.33□□□□□ -2.2
USP8-218ENST00000561330 TXNL4BQ9NX01 149 aaKnown RBP1.33□□□□□ -2.2
USP8-218ENST00000561330 PXDNLA1KZ92 1463 aa1.32□□□□□ -2.2
USP8-218ENST00000561330 J3QLI3 93 aa1.32□□□□□ -2.2
USP8-218ENST00000561330 CDIPTO14735 213 aa1.32□□□□□ -2.2
USP8-218ENST00000561330 VN1R4Q7Z5H5 301 aa1.32□□□□□ -2.2
USP8-218ENST00000561330 SELENOHQ8IZQ5 122 aaKnown RBP1.32□□□□□ -2.2
USP8-218ENST00000561330 GALMQ96C23 342 aa1.32□□□□□ -2.2
USP8-218ENST00000561330 MBOAT7Q96N66 472 aa1.32□□□□□ -2.2
USP8-218ENST00000561330 METTL8Q9H825 291 aaKnown RBP1.32□□□□□ -2.2
USP8-218ENST00000561330 PTPRJQ12913 1337 aa1.32□□□□□ -2.2
USP8-218ENST00000561330 USP42Q9H9J4 1324 aaKnown RBP1.32□□□□□ -2.2
USP8-218ENST00000561330 LCTP09848 1927 aa1.32□□□□□ -2.2
USP8-218ENST00000561330 OTOFQ9HC10 1997 aa1.32□□□□□ -2.2
USP8-218ENST00000561330 TRPM3Q9HCF6 1732 aaPredicted RBP1.32□□□□□ -2.2
USP8-218ENST00000561330 A0A0G2JQZ4 141 aa1.31□□□□□ -2.2
USP8-218ENST00000561330 GOLGA8IPA6NC78 632 aa1.31□□□□□ -2.2
USP8-218ENST00000561330 B4DEV8 164 aa1.31□□□□□ -2.2
USP8-218ENST00000561330 C8orf87E5RJ46 101 aa1.31□□□□□ -2.2
USP8-218ENST00000561330 BOLA2-SMG1P6H3BVE0 249 aa1.31□□□□□ -2.2
USP8-218ENST00000561330 SOD1P00441 154 aa1.31□□□□□ -2.2
USP8-218ENST00000561330 CSTAP01040 98 aa1.31□□□□□ -2.2
USP8-218ENST00000561330 FBP1P09467 338 aa1.31□□□□□ -2.2
USP8-218ENST00000561330 CD36P16671 472 aa1.31□□□□□ -2.2
USP8-218ENST00000561330 PSMA1P25786 263 aaKnown RBP1.31□□□□□ -2.2
USP8-218ENST00000561330 CD164Q04900 197 aa1.31□□□□□ -2.2
USP8-218ENST00000561330 BSPH1Q075Z2 132 aa1.31□□□□□ -2.2
USP8-218ENST00000561330 TRIML2Q8N7C3 387 aa1.31□□□□□ -2.2
USP8-218ENST00000561330 ZNF563Q8TA94 476 aa1.31□□□□□ -2.2
USP8-218ENST00000561330 EBNA1BP2Q99848 306 aaKnown RBP1.31□□□□□ -2.2
USP8-218ENST00000561330 TAS2R13Q9NYV9 303 aa1.31□□□□□ -2.2
USP8-218ENST00000561330 CLEC2DQ9UHP7 191 aa1.31□□□□□ -2.2
USP8-218ENST00000561330 SCML1Q9UN30 329 aa1.31□□□□□ -2.2
USP8-218ENST00000561330 AMMECR1Q9Y4X0 333 aaPredicted RBP1.31□□□□□ -2.2
USP8-218ENST00000561330 FABP7O15540 132 aa1.3□□□□□ -2.2
USP8-218ENST00000561330 GPX1P07203 203 aa1.3□□□□□ -2.2
USP8-218ENST00000561330 CCNOP22674 350 aa1.3□□□□□ -2.2
USP8-218ENST00000561330 UGT2B10P36537 528 aa1.3□□□□□ -2.2
USP8-218ENST00000561330 GABARAPL2P60520 117 aa1.3□□□□□ -2.2
USP8-218ENST00000561330 C1QTNF8P60827 252 aa1.3□□□□□ -2.2
USP8-218ENST00000561330 DEFA6Q01524 100 aa1.3□□□□□ -2.2
USP8-218ENST00000561330 PAFAH1B3Q15102 231 aaKnown RBP1.3□□□□□ -2.2
USP8-218ENST00000561330 EBLN2Q6P2I7 272 aa1.3□□□□□ -2.2
USP8-218ENST00000561330 ZBTB8OSQ8IWT0 167 aa1.3□□□□□ -2.2
USP8-218ENST00000561330 SUN5Q8TC36 379 aa1.3□□□□□ -2.2
USP8-218ENST00000561330 GPR22Q99680 433 aa1.3□□□□□ -2.2
USP8-218ENST00000561330 Q9BRP9 147 aa1.3□□□□□ -2.2
USP8-218ENST00000561330 HINT2Q9BX68 163 aa1.3□□□□□ -2.2
USP8-218ENST00000561330 C11orf49Q9H6J7 331 aa1.3□□□□□ -2.2
USP8-218ENST00000561330 PSMD13Q9UNM6 376 aa1.3□□□□□ -2.2
USP8-218ENST00000561330 GBF1Q92538 1859 aa1.3□□□□□ -2.2
USP8-218ENST00000561330 EPPINO95925 133 aa1.29□□□□□ -2.2
USP8-218ENST00000561330 ANGP03950 147 aaKnown RBP1.29□□□□□ -2.2
USP8-218ENST00000561330 SKP2Q13309 424 aa1.29□□□□□ -2.2
USP8-218ENST00000561330 MAPK14Q16539 360 aa1.29□□□□□ -2.2
USP8-218ENST00000561330 OR10A6Q8NH74 314 aa1.29□□□□□ -2.2
USP8-218ENST00000561330 FAM45AQ8TCE6 357 aa1.29□□□□□ -2.2
USP8-218ENST00000561330 C16orf78Q8WTQ4 265 aa1.29□□□□□ -2.2
USP8-218ENST00000561330 IFT81Q8WYA0 676 aa1.29□□□□□ -2.2
USP8-218ENST00000561330 CATSPER2Q96P56 530 aa1.29□□□□□ -2.2
USP8-218ENST00000561330 XKR8Q9H6D3 395 aa1.29□□□□□ -2.2
USP8-218ENST00000561330 IFT46Q9NQC8 304 aa1.29□□□□□ -2.2
USP8-218ENST00000561330 FIS1Q9Y3D6 152 aa1.29□□□□□ -2.2
USP8-218ENST00000561330 IGLV3-9A0A075B6K5 115 aa1.28□□□□□ -2.2
USP8-218ENST00000561330 RAB19A4D1S5 217 aa1.28□□□□□ -2.2
USP8-218ENST00000561330 H0YC42 278 aa1.28□□□□□ -2.2
USP8-218ENST00000561330 CRXO43186 299 aaPredicted RBP1.28□□□□□ -2.2
USP8-218ENST00000561330 IGHV3-30-3P0DP02 117 aa1.28□□□□□ -2.2
USP8-218ENST00000561330 ALOX5APP20292 161 aa1.28□□□□□ -2.2
USP8-218ENST00000561330 CD200P41217 278 aa1.28□□□□□ -2.2
USP8-218ENST00000561330 AQP5P55064 265 aa1.28□□□□□ -2.2
USP8-218ENST00000561330 PDK2Q15119 407 aa1.28□□□□□ -2.2
USP8-218ENST00000561330 MRPL51Q4U2R6 128 aaKnown RBP1.28□□□□□ -2.2
USP8-218ENST00000561330 LGALS9CQ6DKI2 356 aa1.28□□□□□ -2.2
USP8-218ENST00000561330 OR5D18Q8NGL1 313 aa1.28□□□□□ -2.2
USP8-218ENST00000561330 OR11L1Q8NGX0 322 aa1.28□□□□□ -2.2
USP8-218ENST00000561330 ZNRF2Q8NHG8 242 aa1.28□□□□□ -2.2
USP8-218ENST00000561330 OR5P2Q8WZ92 322 aa1.28□□□□□ -2.2
USP8-218ENST00000561330 MRPS24Q96EL2 167 aaKnown RBP1.28□□□□□ -2.2
USP8-218ENST00000561330 MGLLQ99685 303 aa1.28□□□□□ -2.2
USP8-218ENST00000561330 UPK3BQ9BT76 320 aa1.28□□□□□ -2.2
USP8-218ENST00000561330 CHTOPQ9Y3Y2 248 aaKnown RBP1.28□□□□□ -2.2
USP8-218ENST00000561330 RTEL1-TNFRSF6BF6WH68 1400 aa1.28□□□□□ -2.2
USP8-218ENST00000561330 MPDZO75970 2070 aa1.27□□□□□ -2.21
USP8-218ENST00000561330 AK9Q5TCS8 1911 aa1.27□□□□□ -2.21
USP8-218ENST00000561330 RGS12O14924 1447 aa1.27□□□□□ -2.21
USP8-218ENST00000561330 IGHV3-73A0A0B4J1V6 119 aa1.27□□□□□ -2.21
USP8-218ENST00000561330 H3BSA7 217 aa1.27□□□□□ -2.21
USP8-218ENST00000561330 CTSEP14091 401 aa1.27□□□□□ -2.21
USP8-218ENST00000561330 ATF1P18846 271 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms