RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 FAM106CPP0CH98 169 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 DTYMKP23919 212 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 S100GP29377 79 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 PRSS3P35030 304 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 SSTR5P35346 364 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 CEACAM6P40199 344 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 QRFPP83859 136 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 HES1Q14469 280 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 LRRC75BQ2VPJ9 315 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 DEFB112Q30KQ8 113 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 Q3ZCU0 254 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 HACD4Q5VWC8 232 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 BAIAP2L2Q6UXY1 529 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 C9orf139Q6ZV77 190 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 MOB3BQ86TA1 216 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 Q8N7P7 452 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 OR11H6Q8NGC7 330 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 C1orf147Q96MC9 270 aaPredicted RBP8.76□□□□□ -1.01
TPM1-229ENST00000561242 SLC23A1Q9UHI7 598 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 JPT1Q9UK76 154 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 POMT1Q9Y6A1 747 aa8.76□□□□□ -1.01
TPM1-229ENST00000561242 IGHV3-43A0A0B4J1X8 118 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 A0A0U1RQK1 487 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 SHISA3A0PJX4 238 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 RNF212BA8MTL3 300 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 J3QR06 171 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 BET1O15155 118 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 FABP7O15540 132 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 TXNL1O43396 289 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 XRCC3O43542 346 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 APOA1P02647 267 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 IGHV3-43DP0DP04 118 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 RCC1P18754 421 aaPredicted RBP8.75□□□□□ -1.01
TPM1-229ENST00000561242 INPP1P49441 399 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 EFNB2P52799 333 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 HLA-DRB3P79483 266 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 HTD2P86397 168 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 PRB3Q04118 309 aaPredicted RBP8.75□□□□□ -1.01
TPM1-229ENST00000561242 PLA1AQ53H76 456 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 C16orf87Q6PH81 154 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 IZUMO1Q8IYV9 350 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 LYG1Q8N1E2 194 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 TMEM86BQ8N661 226 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 BEND2Q8NDZ0 799 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 OR10V1Q8NGI7 309 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 OR4A4PQ8NGN8 299 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 MCFD2Q8NI22 146 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 MRPL30Q8TCC3 161 aaKnown RBP8.75□□□□□ -1.01
TPM1-229ENST00000561242 DYRK2Q92630 601 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 ISOC1Q96CN7 298 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 KIRREL1Q96J84 757 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 SSX3Q99909 188 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 ABCG5Q9H222 651 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 MMP28Q9H239 520 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 GFOD1Q9NXC2 390 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 PIPOXQ9P0Z9 390 aa8.75□□□□□ -1.01
TPM1-229ENST00000561242 C12orf77C9JDV5 145 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 LDLRAD4O15165 306 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 HOXA3O43365 443 aaPredicted RBP8.74□□□□□ -1.01
TPM1-229ENST00000561242 YPEL1O60688 119 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 IGHV3-7P01780 117 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 IFNA6P05013 189 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 TGFBR1P36897 503 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 HILS1P60008 231 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 C17orf58Q2M2W7 97 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 KLF17Q5JT82 389 aaPredicted RBP8.74□□□□□ -1.01
TPM1-229ENST00000561242 ZNF626Q68DY1 528 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 SIGIRRQ6IA17 410 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 DHRS7BQ6IAN0 325 aaPredicted RBP8.74□□□□□ -1.01
TPM1-229ENST00000561242 Q6YL49 198 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 C1orf229Q6ZS94 237 aaPredicted RBP8.74□□□□□ -1.01
TPM1-229ENST00000561242 TMEM17Q86X19 198 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 BCL6BQ8N143 479 aaPredicted RBP8.74□□□□□ -1.01
TPM1-229ENST00000561242 OR1L1Q8NH94 360 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 UBALD1Q8TB05 177 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 ZFAND2BQ8WV99 257 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 BORCS5Q969J3 196 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 DACT3Q96B18 629 aaPredicted RBP8.74□□□□□ -1.01
TPM1-229ENST00000561242 DGCR14Q96DF8 476 aaKnown RBP8.74□□□□□ -1.01
TPM1-229ENST00000561242 DIRAS2Q96HU8 199 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 YPEL2Q96QA6 119 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 NAA50Q9GZZ1 169 aaKnown RBP8.74□□□□□ -1.01
TPM1-229ENST00000561242 Q9N2K0 584 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 CCDC59Q9P031 241 aaKnown RBP8.74□□□□□ -1.01
TPM1-229ENST00000561242 PSG11Q9UQ72 335 aa8.74□□□□□ -1.01
TPM1-229ENST00000561242 HIVEP2P31629 2446 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 TRBV6-6A0A0A6YYG2 114 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 TMEM235A6NFC5 223 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 NPIPB11E5RHQ5 1161 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 BUB1B-PAK6H3BSN5 160 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 RAB27BO00194 218 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 RAB29O14966 203 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 HPGDSO60760 199 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 SLC22A5O76082 557 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 RCVRNP35243 200 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 GPR12P47775 334 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 TMEM50BP56557 158 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 TSPAN5P62079 268 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 IL18Q14116 193 aa8.73□□□□□ -1.01
TPM1-229ENST00000561242 AANATQ16613 207 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms