RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 FAM216AQ8WUB2 273 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 SECTM1Q8WVN6 248 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 IL1F10Q8WWZ1 152 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 TMEM106BQ9NUM4 274 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 OR6C3Q9NZP0 311 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 COL6A6A6NMZ7 2263 aa14.29□□□□□ -0.12
HDDC3-206ENST00000561036 PPIAL4EA0A075B759 164 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 IGKV1D-13A0A0B4J2D9 117 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 B8ZZF3 427 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 PPIAL4DF5H284 164 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 SIGLEC5O15389 551 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 MPPED1O15442 326 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 SPINT2O43291 252 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 B3GALNT1O75752 331 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 FSTL3O95633 263 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 HBZP02008 142 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 WNT2P09544 360 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 PPIAL4FP0DN26 164 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 IGKV1-13P0DP09 117 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 LUMP51884 338 aaPredicted RBP14.28□□□□□ -0.12
HDDC3-206ENST00000561036 SRPXP78539 464 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 HTD2P86397 168 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 FGL1Q08830 312 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 PHLDA2Q53GA4 152 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 FAM201AQ5SY85 155 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 GSG1LQ6UXU4 331 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 LRTM2Q8N967 370 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 OR10V1Q8NGI7 309 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 AKR1E2Q96JD6 320 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 GAFA1Q96PS6 74 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 OR1A1Q9P1Q5 309 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 PPIAL4AQ9Y536 164 aa14.28□□□□□ -0.12
HDDC3-206ENST00000561036 TPRP12270 2363 aaKnown RBP14.27□□□□□ -0.12
HDDC3-206ENST00000561036 CEACAM6P40199 344 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 EDDM3AQ14507 147 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 TMEM187Q14656 261 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 MSMO1Q15800 293 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 C9orf62Q8N4C0 152 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 ZNRF1Q8ND25 227 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 BVESQ8NE79 360 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 OR11H4Q8NGC9 324 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 OR13A1Q8NGR1 328 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 OR1L1Q8NH94 360 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 MRGPRDQ8TDS7 321 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 C14orf79Q96F83 325 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 PDCD10Q9BUL8 212 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 NMES1Q9C002 83 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 CBLN4Q9NTU7 201 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 RDH8Q9NYR8 311 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 ACACBO00763 2458 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 DYSFO75923 2080 aa14.27□□□□□ -0.13
HDDC3-206ENST00000561036 PIGBOS1A0A0B4J2F0 54 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 IGHV1-69-2A0A0G2JMI3 117 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 HMSDA8MTL9 139 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 C15orf65H3BRN8 121 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 NDUFA2O43678 99 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 GOSR1O95249 250 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 GYPAP02724 150 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 IGFBP2P18065 325 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 LAMTOR1Q6IAA8 161 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 LIAT1Q6ZQX7 453 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 ZNF818PQ6ZRF7 136 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 TGIF2LYQ8IUE0 185 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 PRR18Q8N4B5 295 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 ZBTB8BQ8NAP8 495 aaPredicted RBP14.26□□□□□ -0.13
HDDC3-206ENST00000561036 DEFB108BQ8NET1 73 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 CCL17Q92583 94 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 NINJ1Q92982 152 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 ARL11Q969Q4 196 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 CCL28Q9NRJ3 127 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 COMMD9Q9P000 198 aa14.26□□□□□ -0.13
HDDC3-206ENST00000561036 C3orf85A0A1B0GTC6 90 aa14.25□□□□□ -0.13
HDDC3-206ENST00000561036 C5orf51A6NDU8 294 aa14.25□□□□□ -0.13
HDDC3-206ENST00000561036 CCSO14618 274 aa14.25□□□□□ -0.13
HDDC3-206ENST00000561036 TNFRSF13BO14836 293 aaPredicted RBP14.25□□□□□ -0.13
HDDC3-206ENST00000561036 IFNA21P01568 189 aa14.25□□□□□ -0.13
HDDC3-206ENST00000561036 OR5AC1P0C628 307 aa14.25□□□□□ -0.13
HDDC3-206ENST00000561036 HFEQ30201 348 aa14.25□□□□□ -0.13
HDDC3-206ENST00000561036 TMEM30BQ3MIR4 351 aa14.25□□□□□ -0.13
HDDC3-206ENST00000561036 Q5BKY6 102 aa14.25□□□□□ -0.13
HDDC3-206ENST00000561036 LGI3Q8N145 548 aa14.25□□□□□ -0.13
HDDC3-206ENST00000561036 ZBTB34Q8NCN2 500 aa14.25□□□□□ -0.13
HDDC3-206ENST00000561036 CCL13Q99616 98 aa14.25□□□□□ -0.13
HDDC3-206ENST00000561036 RAB1BQ9H0U4 201 aa14.25□□□□□ -0.13
HDDC3-206ENST00000561036 METTL8Q9H825 291 aaKnown RBP14.25□□□□□ -0.13
HDDC3-206ENST00000561036 DCAF16Q9NXF7 216 aa14.25□□□□□ -0.13
HDDC3-206ENST00000561036 TANC2Q9HCD6 1990 aa14.24□□□□□ -0.13
HDDC3-206ENST00000561036 FAM25EA8MYX2 175 aa14.24□□□□□ -0.13
HDDC3-206ENST00000561036 F2RL2O00254 374 aa14.24□□□□□ -0.13
HDDC3-206ENST00000561036 HSD17B6O14756 317 aa14.24□□□□□ -0.13
HDDC3-206ENST00000561036 CGB3P0DN86 165 aa14.24□□□□□ -0.13
HDDC3-206ENST00000561036 CGB7P0DN87 165 aa14.24□□□□□ -0.13
HDDC3-206ENST00000561036 C4BPBP20851 252 aa14.24□□□□□ -0.13
HDDC3-206ENST00000561036 C11orf71Q6IPW1 123 aa14.24□□□□□ -0.13
HDDC3-206ENST00000561036 TBC1D26Q86UD7 250 aa14.24□□□□□ -0.13
HDDC3-206ENST00000561036 DTX2Q86UW9 622 aa14.24□□□□□ -0.13
HDDC3-206ENST00000561036 TPRX1Q8N7U7 411 aa14.24□□□□□ -0.13
HDDC3-206ENST00000561036 GLYATL2Q8WU03 294 aa14.24□□□□□ -0.13
HDDC3-206ENST00000561036 CORO2AQ92828 525 aa14.24□□□□□ -0.13
HDDC3-206ENST00000561036 MSI2Q96DH6 328 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms