RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 J3QRE1 110 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 HAX1O00165 279 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 ADAP1O75689 374 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 HLA-DQB1P01920 261 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 APOA2P02652 100 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 COX5AP20674 150 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 F2RL1P55085 397 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 MRPS11P82912 194 aaKnown RBP4.59□□□□□ -1.67
VPS13C-209ENST00000560637 SPRNQ5BIV9 151 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 C16orf54Q6UWD8 224 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 FAM90A1Q86YD7 464 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 PNKDQ8N490 385 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 OR4A16Q8NH70 328 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 RNF138Q8WVD3 245 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 LHX4Q969G2 390 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 MED30Q96HR3 178 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 DIRC2Q96SL1 478 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 ZNF251Q9BRH9 671 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 PARP12Q9H0J9 701 aaKnown RBP4.59□□□□□ -1.67
VPS13C-209ENST00000560637 RAB9BQ9NP90 201 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 AKIP1Q9NQ31 210 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 MTFP1Q9UDX5 166 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 NUBP2Q9Y5Y2 271 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 TNRC6BQ9UPQ9 1833 aaKnown RBP4.59□□□□□ -1.67
VPS13C-209ENST00000560637 DSCAMO60469 2012 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 TMEM210A6NLX4 147 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 PTTG1O95997 202 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 THBDP07204 575 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 HOXA1P49639 335 aaPredicted RBP4.59□□□□□ -1.67
VPS13C-209ENST00000560637 BTG1P62324 171 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 LINC01559Q495D7 138 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 PLAC9Q5JTB6 97 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 NCMAPQ5T1S8 102 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 DCAF12L2Q5VW00 463 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 FAM53AQ6NSI3 398 aaPredicted RBP4.59□□□□□ -1.67
VPS13C-209ENST00000560637 LYPD2Q6UXB3 125 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 Q6ZR03 302 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 H2BFWTQ7Z2G1 175 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 OR2W3Q7Z3T1 314 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 GAPTQ8N292 157 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 OR13A1Q8NGR1 328 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 TERB2Q8NHR7 220 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 PIMREGQ9BSJ6 248 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 MS4A7Q9GZW8 240 aaPredicted RBP4.59□□□□□ -1.67
VPS13C-209ENST00000560637 PLEKHF2Q9H8W4 249 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 BARX1Q9HBU1 254 aaPredicted RBP4.59□□□□□ -1.67
VPS13C-209ENST00000560637 TMEM165Q9HC07 324 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 GCM1Q9NP62 436 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 PALMDQ9NP74 551 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 OR6C3Q9NZP0 311 aa4.59□□□□□ -1.67
VPS13C-209ENST00000560637 CEACAM18A8MTB9 384 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 IQCF6A8MYZ5 107 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 MGST3O14880 152 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 PSPNO60542 156 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 FCGR3AP08637 254 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 IL3RAP26951 378 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 PDLIM4P50479 330 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 TMEM50BP56557 158 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 RRAS2P62070 204 aaPredicted RBP4.59□□□□□ -1.68
VPS13C-209ENST00000560637 CD200R1LQ6Q8B3 271 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 CLEC9AQ6UXN8 241 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 ACP7Q6ZNF0 438 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 MFSD4AQ8N468 514 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 C11orf44Q8N8P7 122 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 OR5AP2Q8NGF4 316 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 OR5D13Q8NGL4 314 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 EDARADDQ8WWZ3 215 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 GAL3ST2Q9H3Q3 398 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 C7orf69Q9H7B7 122 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 DLL4Q9NR61 685 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 V9GYS6 101 aa4.59□□□□□ -1.68
VPS13C-209ENST00000560637 LOC105371242A0A075B767 164 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 NAP1L6A6NFF2 107 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 A6NNC1 897 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 SC5DO75845 299 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 SPDEFO95238 335 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 ARG1P05089 322 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 C4BPBP20851 252 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 OR2B8PP59922 312 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 IFITM3Q01628 133 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 TESK1Q15569 626 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 SPANXN5Q5MJ07 72 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 GPR157Q5UAW9 335 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 UNQ9370/PRO34162Q6UXP9 181 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 BRD3OSQ6XYD6 125 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 VKORC1L1Q8N0U8 176 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 GCSAMQ8N6F7 178 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 OR13C8Q8NGS7 320 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 FAM222BQ8WU58 562 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 ZNF714Q96N38 554 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 GFI1Q99684 422 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 YAE1D1Q9NRH1 226 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 ZNRD1Q9P1U0 126 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 IL19Q9UHD0 177 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 INSIG2Q9Y5U4 225 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 V9GYH0 126 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 A0A0G2JK05 382 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 CDK2AP1O14519 115 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 CST4P01036 141 aa4.58□□□□□ -1.68
VPS13C-209ENST00000560637 CGAP01215 116 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms