RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 SSR4P51571 173 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 FOXL2P58012 376 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 MLF1P58340 268 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 SLC10A1Q14973 349 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 USF2Q15853 346 aaPredicted RBP7.39□□□□□ -1.23
CCDC33-209ENST00000560565 HIST3H3Q16695 136 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 C10orf128Q5T292 105 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 BTNL3Q6UXE8 466 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 ASCL4Q6XD76 172 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 FOXL2NBQ6ZUU3 175 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 FAM57BQ71RH2 274 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 LINC00596Q86U02 117 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 RPS19BP1Q86WX3 136 aaKnown RBP7.39□□□□□ -1.23
CCDC33-209ENST00000560565 PRR22Q8IZ63 422 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 OR2V1Q8NHB1 315 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 CLDND2Q8NHS1 167 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 Q8WTZ3 238 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 HPSE2Q8WWQ2 592 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 TOMM40LQ969M1 308 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 MSI2Q96DH6 328 aaKnown RBP7.39□□□□□ -1.23
CCDC33-209ENST00000560565 BORCS8Q96FH0 119 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 FER1L6-AS2Q96M78 137 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 FOXN4Q96NZ1 517 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 TMEM222Q9H0R3 208 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 Q9N2K0 584 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 P4HTMQ9NXG6 502 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 LRFN1Q9P244 771 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 NAT8Q9UHE5 227 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 ZDHHC8Q9ULC8 765 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 LHFPL6Q9Y693 200 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 PCNX1Q96RV3 2341 aa7.39□□□□□ -1.23
CCDC33-209ENST00000560565 SPENQ96T58 3664 aaKnown RBP7.38□□□□□ -1.23
CCDC33-209ENST00000560565 A0A1B0GU03 582 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 K7EM74 188 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 MPPED1O15442 326 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 LMX1BO60663 402 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 PDCD6O75340 191 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 CNOT4O95628 575 aaKnown RBP7.38□□□□□ -1.23
CCDC33-209ENST00000560565 FABP4P15090 132 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 AADACP22760 399 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 SRP14P37108 136 aaKnown RBP7.38□□□□□ -1.23
CCDC33-209ENST00000560565 FUT6P51993 359 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 CLDN15P56746 228 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 PCBD1P61457 104 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 LCN2P80188 198 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 RELQ04864 619 aaPredicted RBP7.38□□□□□ -1.23
CCDC33-209ENST00000560565 FMODQ06828 376 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 KLRB1Q12918 225 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 MFAP5Q13361 173 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 ICAM4Q14773 271 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 DCAF10Q5QP82 559 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 CLEC9AQ6UXN8 241 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 TMEM252Q8N6L7 170 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 MBD3L1Q8WWY6 194 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 IMMP2LQ96T52 175 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 TXNDC17Q9BRA2 123 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 PLK3Q9H4B4 646 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 METTL7AQ9H8H3 244 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 MANBALQ9NQG1 85 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 ABI3Q9P2A4 366 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 PIGLQ9Y2B2 252 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 TIMM9Q9Y5J7 89 aa7.38□□□□□ -1.23
CCDC33-209ENST00000560565 AQP7P3A6NL99 342 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 H0Y980 276 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 M0R135 149 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 M0R143 59 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 TCAPO15273 167 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 CEACAM4O75871 244 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 VENTXO95231 258 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 TRGC2P03986 189 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 TRGC1P0CF51 173 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 CD99P14209 185 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 DAOP14920 347 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 FUT3P21217 361 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 EPHA1P21709 976 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 PPP1CCP36873 323 aaKnown RBP7.37□□□□□ -1.23
CCDC33-209ENST00000560565 SOX8P57073 446 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 RAB35Q15286 201 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 ATP6V1FQ16864 119 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 ETV3LQ6ZN32 361 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 LYZL2Q7Z4W2 148 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 SAXO1Q8IYX7 474 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 OSR2Q8N2R0 312 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 CISD2Q8N5K1 135 aaKnown RBP7.37□□□□□ -1.23
CCDC33-209ENST00000560565 CYB561D1Q8N8Q1 229 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 ZFP62Q8NB50 900 aaPredicted RBP7.37□□□□□ -1.23
CCDC33-209ENST00000560565 FDCSPQ8NFU4 85 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 OR10AD1Q8NGE0 317 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 OR5D13Q8NGL4 314 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 OR10S1Q8NGN2 331 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 OR1P1Q8NH06 330 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 THAP3Q8WTV1 239 aaPredicted RBP7.37□□□□□ -1.23
CCDC33-209ENST00000560565 R3HDM4Q96D70 268 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 ZNF799Q96GE5 643 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 GMPPAQ96IJ6 420 aaPredicted RBP7.37□□□□□ -1.23
CCDC33-209ENST00000560565 CDH20Q9HBT6 801 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 SH2D2AQ9NP31 389 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 KLRF1Q9NZS2 232 aa7.37□□□□□ -1.23
CCDC33-209ENST00000560565 FOXD3Q9UJU5 478 aaPredicted RBP7.37□□□□□ -1.23
CCDC33-209ENST00000560565 LIPGQ9Y5X9 500 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms