RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 RBMXL1Q96E39 390 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-216ENST00000560243 SULT4A1Q9BR01 284 aa9.31□□□□□ -0.92
RABGGTA-216ENST00000560243 NICN1Q9BSH3 213 aa9.31□□□□□ -0.92
RABGGTA-216ENST00000560243 PRSS22Q9GZN4 317 aa9.31□□□□□ -0.92
RABGGTA-216ENST00000560243 CST11Q9H112 138 aa9.31□□□□□ -0.92
RABGGTA-216ENST00000560243 ACOT13Q9NPJ3 140 aa9.31□□□□□ -0.92
RABGGTA-216ENST00000560243 GFOD1Q9NXC2 390 aa9.31□□□□□ -0.92
RABGGTA-216ENST00000560243 GHRLQ9UBU3 117 aa9.31□□□□□ -0.92
RABGGTA-216ENST00000560243 TRAPPC2LQ9UL33 140 aa9.31□□□□□ -0.92
RABGGTA-216ENST00000560243 AK6Q9Y3D8 172 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-216ENST00000560243 TMEM14DPA8MWL7 114 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 OOSP1A8MZH6 123 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 M0QZ24 198 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 SLC31A2O15432 143 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 HBZP02008 142 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 SNRNP70P08621 437 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 UBBP0CG47 229 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 CALRP27797 417 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 CHATP28329 748 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 REG1BP48304 166 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 CLDN12P56749 244 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 RPS27AP62979 156 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 EMX1Q04741 257 aaPredicted RBP9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 C11orf88Q6PI97 169 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 SLC16A12Q6ZSM3 486 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 C6orf201Q7Z4U5 140 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 LYG1Q8N1E2 194 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 PRR18Q8N4B5 295 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 OR10V1Q8NGI7 309 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 OR52M1Q8NGK5 317 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 OR6M1Q8NGM8 313 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 OR10X1Q8NGY0 326 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 MRPL30Q8TCC3 161 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 WIPF2Q8TF74 440 aaPredicted RBP9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 CAPSLQ8WWF8 208 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 CFHR4Q92496 578 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 RBM14Q96PK6 669 aaKnown RBP9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 SLC25A33Q9BSK2 321 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 FAAP24Q9BTP7 215 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 LIN7BQ9HAP6 207 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 BLOC1S6Q9UL45 172 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 AMMECR1Q9Y4X0 333 aaPredicted RBP9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 NOTCH3Q9UM47 2321 aa9.3□□□□□ -0.92
RABGGTA-216ENST00000560243 SHISA3A0PJX4 238 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 FAM90A9PA6NNJ1 464 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 SLC17A2O00624 439 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 ARL6IP5O75915 188 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 OR2F2O95006 317 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 BPNT1O95861 308 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 GLAP06280 429 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 CD28P10747 220 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 MNDAP41218 407 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 ARHGDIBP52566 201 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 ZNF134P52741 427 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 GNMTQ14749 295 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 TRAM1Q15629 374 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 ABCA11PQ4W5N1 156 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 CCDC144NLQ6NUI1 221 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 Q6ZPA2 131 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 Q6ZTK2 550 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 ZNF367Q7RTV3 350 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 ZNF439Q8NDP4 499 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 KCNG3Q8TAE7 436 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 OCSTAMPQ9BR26 566 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 TM2D1Q9BX74 207 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 TMEM59Q9BXS4 323 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 WNT10AQ9GZT5 417 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 LPAR5Q9H1C0 372 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 PLGRKTQ9HBL7 147 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 TAF9BQ9HBM6 251 aa9.29□□□□□ -0.92
RABGGTA-216ENST00000560243 IGHV3-72A0A0B4J1Y9 119 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 HSD17B6O14756 317 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 SOCS1O15524 211 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 SPINT2O43291 252 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 DENRO43583 198 aaKnown RBP9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 CA11O75493 328 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 LPLP06858 475 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 PSMA1P25786 263 aaKnown RBP9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 VDAC2P45880 294 aaPredicted RBP9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 OR10A3P58181 314 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 GABARAPL2P60520 117 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 PLA2G7Q13093 441 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 HNF4GQ14541 408 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 ARSJQ5FYB0 599 aaPredicted RBP9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 CT45A1Q5HYN5 189 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 C6orf183Q5T699 404 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 C16orf82Q7Z2V1 217 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 SPARTQ8N0X7 666 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 LINC00311Q8N616 119 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 OR51D1Q8NGF3 324 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 OR52L2PQ8NGH6 319 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 CT45A3Q8NHU0 189 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 FAM110DQ8TAY7 271 aaPredicted RBP9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 ST6GALNAC6Q969X2 333 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 NEDD4LQ96PU5 975 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 MMP27Q9H306 513 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 MBNL3Q9NUK0 354 aaKnown RBP9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 NDUFB11Q9NX14 153 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 GNG12Q9UBI6 72 aa9.28□□□□□ -0.92
RABGGTA-216ENST00000560243 IGHV1-3A0A0C4DH29 117 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms