RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 BLCAPP62952 87 aa11.9□□□□□ -0.5
RABGGTA-211ENST00000559850 UBE2UQ5VVX9 321 aa11.9□□□□□ -0.5
RABGGTA-211ENST00000559850 C22orf42Q6IC83 251 aa11.9□□□□□ -0.5
RABGGTA-211ENST00000559850 LIAT1Q6ZQX7 453 aa11.9□□□□□ -0.5
RABGGTA-211ENST00000559850 C11orf44Q8N8P7 122 aa11.9□□□□□ -0.5
RABGGTA-211ENST00000559850 SGMS2Q8NHU3 365 aa11.9□□□□□ -0.5
RABGGTA-211ENST00000559850 KCNG3Q8TAE7 436 aa11.9□□□□□ -0.5
RABGGTA-211ENST00000559850 MRPL30Q8TCC3 161 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-211ENST00000559850 TOMM40LQ969M1 308 aa11.9□□□□□ -0.5
RABGGTA-211ENST00000559850 RBMXL1Q96E39 390 aaKnown RBP11.9□□□□□ -0.5
RABGGTA-211ENST00000559850 NPFFR1Q9GZQ6 430 aa11.9□□□□□ -0.5
RABGGTA-211ENST00000559850 LPAR5Q9H1C0 372 aa11.9□□□□□ -0.5
RABGGTA-211ENST00000559850 RAB18Q9NP72 206 aa11.9□□□□□ -0.5
RABGGTA-211ENST00000559850 GFOD1Q9NXC2 390 aa11.9□□□□□ -0.5
RABGGTA-211ENST00000559850 FBLN5Q9UBX5 448 aa11.9□□□□□ -0.5
RABGGTA-211ENST00000559850 LRRC42Q9Y546 428 aa11.9□□□□□ -0.5
RABGGTA-211ENST00000559850 SOCS1O15524 211 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 VSIG10L2P0DP72 767 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 KIR2DS4P43632 304 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 REG1BP48304 166 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 EFNB2P52799 333 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 LOXL3P58215 753 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 GNMTQ14749 295 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 TMEM95Q3KNT9 176 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 GAPTQ8N292 157 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 OR10A7Q8NGE5 316 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 OR10X1Q8NGY0 326 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 OR2T6Q8NHC8 308 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 CAPSLQ8WWF8 208 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 RPEQ96AT9 228 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 NEDD4LQ96PU5 975 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 TM2D1Q9BX74 207 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 RANBP3Q9H6Z4 567 aaPredicted RBP11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 TAF9BQ9HBM6 251 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 PITPNC1Q9UKF7 332 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 AMMECR1Q9Y4X0 333 aaPredicted RBP11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 V9GY05 133 aa11.89□□□□□ -0.51
RABGGTA-211ENST00000559850 NBEAL1Q6ZS30 2694 aa11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 TET2Q6N021 2002 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 A0A0B4J203 849 aa11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 TRDV1A0A1B0GX56 115 aa11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 CCRL2O00421 344 aa11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 TIMM23O14925 209 aa11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 MRPS14O60783 128 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 BLVRBP30043 206 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 BRS3P32247 399 aa11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 C2orf76Q3KRA6 126 aa11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 C6orf183Q5T699 404 aa11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 ZNF773Q6PK81 442 aa11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 CD200R1LQ6Q8B3 271 aa11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 Q6ZPA2 131 aa11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 DRAM1Q8N682 238 aa11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 KLHDC1Q8N7A1 406 aa11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 OR52L2PQ8NGH6 319 aa11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 OR56B4Q8NH76 319 aa11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 SETD6Q8TBK2 473 aa11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 CREB3L1Q96BA8 519 aa11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 HDHD3Q9BSH5 251 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-211ENST00000559850 A0A1W2PPI3 338 aa11.87□□□□□ -0.51
RABGGTA-211ENST00000559850 SPINT2O43291 252 aa11.87□□□□□ -0.51
RABGGTA-211ENST00000559850 GLAP06280 429 aa11.87□□□□□ -0.51
RABGGTA-211ENST00000559850 SNRNP70P08621 437 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-211ENST00000559850 MNDAP41218 407 aa11.87□□□□□ -0.51
RABGGTA-211ENST00000559850 VEGFCP49767 419 aa11.87□□□□□ -0.51
RABGGTA-211ENST00000559850 MADCAM1Q13477 382 aa11.87□□□□□ -0.51
RABGGTA-211ENST00000559850 NEDD8Q15843 81 aa11.87□□□□□ -0.51
RABGGTA-211ENST00000559850 PRR31Q5SQ13 230 aa11.87□□□□□ -0.51
RABGGTA-211ENST00000559850 OR2W3Q7Z3T1 314 aa11.87□□□□□ -0.51
RABGGTA-211ENST00000559850 FAM3DQ96BQ1 224 aa11.87□□□□□ -0.51
RABGGTA-211ENST00000559850 SLC25A33Q9BSK2 321 aa11.87□□□□□ -0.51
RABGGTA-211ENST00000559850 YTHDF1Q9BYJ9 559 aaKnown RBP11.87□□□□□ -0.51
RABGGTA-211ENST00000559850 CHMP1AQ9HD42 196 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-211ENST00000559850 SERTAD4Q9NUC0 356 aa11.87□□□□□ -0.51
RABGGTA-211ENST00000559850 GNG12Q9UBI6 72 aa11.87□□□□□ -0.51
RABGGTA-211ENST00000559850 AK3Q9UIJ7 227 aa11.87□□□□□ -0.51
RABGGTA-211ENST00000559850 IGHV3-72A0A0B4J1Y9 119 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 TMEM272A0A1B0GTI8 110 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 HSD17B6O14756 317 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 MYL9P24844 172 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 ARHGDIBP52566 201 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 ZNF134P52741 427 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 HNF4GQ14541 408 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 ARSJQ5FYB0 599 aaPredicted RBP11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 CCDC144NLQ6NUI1 221 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 SLC16A12Q6ZSM3 486 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 NR2C2APQ86WQ0 139 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 LYG1Q8N1E2 194 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 OR52M1Q8NGK5 317 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 CFHR4Q92496 578 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 URM1Q9BTM9 101 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 PRSS22Q9GZN4 317 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 OR51E2Q9H255 320 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 ZNF696Q9H7X3 374 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 MBNL3Q9NUK0 354 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 PLEKHJ1Q9NW61 149 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 TXNL4BQ9NX01 149 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 KCNIP1Q9NZI2 227 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 STEAP1Q9UHE8 339 aa11.86□□□□□ -0.51
RABGGTA-211ENST00000559850 TRAV1-2A0A0B4J238 106 aa11.85□□□□□ -0.51
RABGGTA-211ENST00000559850 FOXI3A8MTJ6 420 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms