RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 NKAIN3Q8N8D7 197 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 OR8H1Q8NGG4 311 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 OR13C5Q8NGS8 318 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 MUL1Q969V5 352 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 EAF1Q96JC9 268 aaPredicted RBP9.7□□□□□ -0.86
SPG11-219ENST00000559822 NOL4LQ96MY1 436 aaPredicted RBP9.7□□□□□ -0.86
SPG11-219ENST00000559822 ETAA1Q9NY74 926 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 ZNF581Q9P0T4 197 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 RCC2Q9P258 522 aaKnown RBP9.7□□□□□ -0.86
SPG11-219ENST00000559822 GNG12Q9UBI6 72 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 CLEC2DQ9UHP7 191 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 TRAV8-7A0A075B6U6 113 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 TRBV5-7A0A0A0MS05 114 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 A0A1W2PP11 408 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 MYL12BO14950 172 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 RRP9O43818 475 aaKnown RBP9.69□□□□□ -0.86
SPG11-219ENST00000559822 MOSP00540 346 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 GLAP06280 429 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 MAPK3P27361 379 aaPredicted RBP9.69□□□□□ -0.86
SPG11-219ENST00000559822 CAPGP40121 348 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 MYCNOSP40205 109 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 REG1BP48304 166 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 THBS3P49746 956 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 GP2P55259 537 aaKnown RBP9.69□□□□□ -0.86
SPG11-219ENST00000559822 RPS11P62280 158 aaKnown RBP eCLIP9.69□□□□□ -0.86
SPG11-219ENST00000559822 ST3GAL4Q11206 333 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 DOC2BQ14184 412 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 LRRC36Q1X8D7 754 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 SYT6Q5T7P8 510 aaPredicted RBP9.69□□□□□ -0.86
SPG11-219ENST00000559822 STEAP3Q658P3 488 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 RAB12Q6IQ22 244 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 MRPL41Q8IXM3 137 aaKnown RBP9.69□□□□□ -0.86
SPG11-219ENST00000559822 KLHL30-AS1Q8NEE0 82 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 RTN4IP1Q8WWV3 396 aaPredicted RBP9.69□□□□□ -0.86
SPG11-219ENST00000559822 ORAI1Q96D31 301 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 PGLYRP3Q96LB9 341 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 OR14A2Q96R54 314 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 ABCG5Q9H222 651 aa9.69□□□□□ -0.86
SPG11-219ENST00000559822 CNOT2Q9NZN8 540 aaKnown RBP9.69□□□□□ -0.86
SPG11-219ENST00000559822 IGHV3-43A0A0B4J1X8 118 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 IGHV3-72A0A0B4J1Y9 119 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 C12orf77C9JDV5 145 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 CRTAPO75718 401 aaPredicted RBP9.68□□□□□ -0.86
SPG11-219ENST00000559822 CD1AP06126 327 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 IGHV3-43DP0DP04 118 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 GPR12P47775 334 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 ZNF137PP52743 207 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 ADARB1P78563 741 aaKnown RBP9.68□□□□□ -0.86
SPG11-219ENST00000559822 EGFEM1PQ0D2K5 195 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 PNLIPRP3Q17RR3 467 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 CXorf66Q5JRM2 361 aaPredicted RBP9.68□□□□□ -0.86
SPG11-219ENST00000559822 UNQ9370/PRO34162Q6UXP9 181 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 ETV3LQ6ZN32 361 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 SLC25A48Q6ZT89 311 aaKnown RBP9.68□□□□□ -0.86
SPG11-219ENST00000559822 C8orf86Q6ZUL3 223 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 ZNF554Q86TJ5 538 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 ZNF695Q8IW36 515 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 C8orf59Q8N0T1 100 aaPredicted RBP9.68□□□□□ -0.86
SPG11-219ENST00000559822 Q8N6K4 173 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 ZFP41Q8N8Y5 198 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 ZNF485Q8NCK3 441 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 UBALD1Q8TB05 177 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 GGHQ92820 318 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 ST6GALNAC6Q969X2 333 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 RASL11BQ9BPW5 248 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 UQCC2Q9BRT2 126 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 SELENOIQ9C0D9 397 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 KCNIP1Q9NZI2 227 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 GHRLQ9UBU3 117 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 PEX16Q9Y5Y5 336 aa9.68□□□□□ -0.86
SPG11-219ENST00000559822 MAGEA13PA6NCF6 341 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 K7EIL1 84 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 SC5DO75845 299 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 HBZP02008 142 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 MAS1P04201 325 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 MGMTP16455 207 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 CELP19835 753 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 FUT3P21217 361 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 WNT4P56705 351 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 DEFB121Q5J5C9 76 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 GAPTQ8N292 157 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 Q8N9W7 124 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 ZNF439Q8NDP4 499 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 TMEM104Q8NE00 496 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 OR4K15Q8NH41 348 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 DERL3Q96Q80 235 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 S1PR3Q99500 378 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 CST11Q9H112 138 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 LINC00527Q9UJ94 153 aa9.67□□□□□ -0.86
SPG11-219ENST00000559822 PNMA8CA0A1B0GUJ8 204 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 A0A1W2PPK0 400 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 ELANEP08246 267 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 UBBP0CG47 229 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 OR5H8P0DN80 308 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 VDAC1P21796 283 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 HOXD3P31249 432 aaPredicted RBP9.66□□□□□ -0.86
SPG11-219ENST00000559822 SOX6P35712 828 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 FOXE3Q13461 319 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 GPR50Q13585 617 aa9.66□□□□□ -0.86
SPG11-219ENST00000559822 PRR18Q8N4B5 295 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms