RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ARG1P05089 322 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 ZNF266Q14584 549 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 SPSB3Q6PJ21 355 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 GCNT2Q8N0V5 402 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 CLEC18CQ8NCF0 446 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 PLK3Q9H4B4 646 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 OPA3Q9H6K4 179 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 RNF115Q9Y4L5 304 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 KNTC1P50748 2209 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 TRBV6-6A0A0A6YYG2 114 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 A0A1W2PPE2 198 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 H0YL77 283 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 J3QT63 122 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 IGKV1-39P01597 117 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 IGLV2-14P01704 120 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 IGKV1D-39P04432 117 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 CD46P15529 392 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 IDH3GP51553 393 aaPredicted RBP8.52□□□□□ -1.05
LRRC28-216ENST00000559819 ARG2P78540 354 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 ZNF766Q5HY98 468 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 PLA2G2CQ5R387 149 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 LINC00596Q86U02 117 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 SCCPDHQ8NBX0 429 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 OR10V1Q8NGI7 309 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 CABLES2Q9BTV7 478 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 RIMS4Q9H426 269 aaPredicted RBP8.52□□□□□ -1.05
LRRC28-216ENST00000559819 BIN3Q9NQY0 253 aa8.52□□□□□ -1.05
LRRC28-216ENST00000559819 CDIPTO14735 213 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 LYZL6O75951 148 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 OR2H2O95918 312 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 FBP1P09467 338 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 IAPPP10997 89 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 ZNF16P17020 682 aaPredicted RBP8.51□□□□□ -1.05
LRRC28-216ENST00000559819 CEBPGP53567 150 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 SRSF6Q13247 344 aaKnown RBP8.51□□□□□ -1.05
LRRC28-216ENST00000559819 TESK1Q15569 626 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 HMGN3Q15651 99 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 HAGHQ16775 308 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 TBC1D28Q2M2D7 210 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 KRBOX4Q5JUW0 171 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 FAM53AQ6NSI3 398 aaPredicted RBP8.51□□□□□ -1.05
LRRC28-216ENST00000559819 RNASE11Q8TAA1 199 aaKnown RBP8.51□□□□□ -1.05
LRRC28-216ENST00000559819 FER1L6-AS2Q96M78 137 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 PKIBQ9C010 78 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 SLC35B3Q9H1N7 401 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 KCNJ16Q9NPI9 418 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 KCNS2Q9ULS6 477 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 DUXBA0A1W2PPF3 345 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 SMPD2O60906 423 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 TFF1P04155 84 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 SERPINE2P07093 398 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 MED12LQ86YW9 2145 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 C15orf54Q8N8G6 183 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 NANOS1Q8WY41 292 aaKnown RBP8.51□□□□□ -1.05
LRRC28-216ENST00000559819 PBDC1Q9BVG4 233 aa8.51□□□□□ -1.05
LRRC28-216ENST00000559819 PUS1Q9Y606 427 aaKnown RBP eCLIP8.51□□□□□ -1.05
LRRC28-216ENST00000559819 SPENQ96T58 3664 aaKnown RBP8.51□□□□□ -1.05
LRRC28-216ENST00000559819 hCG_1809904A0A1W2PP81 198 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 A0A1W2PPE3 182 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 A0A1W2PR64 198 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 A0A1W2PRV1 198 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 KIAA1324LA8MWY0 1029 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-216ENST00000559819 CNOT4O95628 575 aaKnown RBP8.5□□□□□ -1.05
LRRC28-216ENST00000559819 GRPP07492 148 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 ZNF14P17017 642 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-216ENST00000559819 HOXA1P49639 335 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-216ENST00000559819 PPP1CBP62140 327 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 SNRPEP62304 92 aaKnown RBP8.5□□□□□ -1.05
LRRC28-216ENST00000559819 SLC25A40Q8TBP6 338 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 GTF3AQ92664 365 aaKnown RBP8.5□□□□□ -1.05
LRRC28-216ENST00000559819 RTL8AQ9BWD3 113 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 CACNG5Q9UF02 275 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 OR14J1Q9UGF5 321 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 TRAPPC2LQ9UL33 140 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 FRYQ5TBA9 3013 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 RBFOX3A6NFN3 312 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 ATXN7O15265 892 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-216ENST00000559819 TXNL1O43396 289 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 IGKV1-5P01602 117 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 IGHV1-2P23083 117 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 CXorf67Q86X51 503 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-216ENST00000559819 IL22RA2Q969J5 263 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 ABHD14BQ96IU4 210 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 ATP5SQ99766 215 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 BCL2L14Q9BZR8 327 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 COA4Q9NYJ1 87 aa8.5□□□□□ -1.05
LRRC28-216ENST00000559819 RBM7Q9Y580 266 aaKnown RBP8.5□□□□□ -1.05
LRRC28-216ENST00000559819 ZNF98A6NK75 572 aa8.49□□□□□ -1.05
LRRC28-216ENST00000559819 HSPA12AO43301 675 aa8.49□□□□□ -1.05
LRRC28-216ENST00000559819 WDR1O75083 606 aa8.49□□□□□ -1.05
LRRC28-216ENST00000559819 AGFG2O95081 481 aa8.49□□□□□ -1.05
LRRC28-216ENST00000559819 CBR1P16152 277 aa8.49□□□□□ -1.05
LRRC28-216ENST00000559819 PTAFRP25105 342 aa8.49□□□□□ -1.05
LRRC28-216ENST00000559819 MPV17P39210 176 aa8.49□□□□□ -1.05
LRRC28-216ENST00000559819 SULT1A1P50225 295 aa8.49□□□□□ -1.05
LRRC28-216ENST00000559819 ZNF497Q6ZNH5 498 aa8.49□□□□□ -1.05
LRRC28-216ENST00000559819 THNSL2Q86YJ6 484 aa8.49□□□□□ -1.05
LRRC28-216ENST00000559819 EGLN1Q9GZT9 426 aa8.49□□□□□ -1.05
LRRC28-216ENST00000559819 CDH20Q9HBT6 801 aa8.49□□□□□ -1.05
LRRC28-216ENST00000559819 LRP5LA4QPB2 252 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms