RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 CHCHD6Q9BRQ6 235 aa12.62□□□□□ -0.39
CDC42BPB-205ENST00000559245 IFT22Q9H7X7 185 aa12.62□□□□□ -0.39
CDC42BPB-205ENST00000559245 VSIG4Q9Y279 399 aa12.62□□□□□ -0.39
CDC42BPB-205ENST00000559245 TMEM212A6NML5 194 aa12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 OVOL1O14753 267 aa12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 SLC31A2O15432 143 aa12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 ORC5O43913 435 aa12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 SAP30O75446 220 aa12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 CDRT1O95170 752 aa12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 RPSAP08865 295 aaKnown RBP12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 SLC2A2P11168 524 aaPredicted RBP12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 SPNP16150 400 aa12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 VHLP40337 213 aa12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 Q3ZCU0 254 aa12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 ZNF529Q6P280 563 aa12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 SLC25A48Q6ZT89 311 aaKnown RBP12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 LHFPL3Q86UP9 236 aa12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 OR5AK2Q8NH90 309 aa12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 MRPL48Q96GC5 212 aaKnown RBP12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 CITED4Q96RK1 184 aa12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 PDCD1LG2Q9BQ51 273 aa12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 ALG8Q9BVK2 526 aa12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 ISG20L2Q9H9L3 353 aaKnown RBP12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 EXOGQ9Y2C4 368 aaKnown RBP12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 AP4S1Q9Y587 144 aa12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 WSB1Q9Y6I7 421 aa12.61□□□□□ -0.39
CDC42BPB-205ENST00000559245 G3V318 75 aa12.6□□□□□ -0.39
CDC42BPB-205ENST00000559245 GEMIN2O14893 280 aaKnown RBP12.6□□□□□ -0.39
CDC42BPB-205ENST00000559245 MYF6P23409 242 aa12.6□□□□□ -0.39
CDC42BPB-205ENST00000559245 ZNF137PP52743 207 aa12.6□□□□□ -0.39
CDC42BPB-205ENST00000559245 RBM11P57052 281 aaKnown RBP12.6□□□□□ -0.39
CDC42BPB-205ENST00000559245 GALEQ14376 348 aa12.6□□□□□ -0.39
CDC42BPB-205ENST00000559245 NHLRC3Q5JS37 347 aa12.6□□□□□ -0.39
CDC42BPB-205ENST00000559245 SLC25A30Q5SVS4 291 aa12.6□□□□□ -0.39
CDC42BPB-205ENST00000559245 ZFAND6Q6FIF0 208 aa12.6□□□□□ -0.39
CDC42BPB-205ENST00000559245 OR52N1Q8NH53 320 aa12.6□□□□□ -0.39
CDC42BPB-205ENST00000559245 LGALS12Q96DT0 336 aa12.6□□□□□ -0.39
CDC42BPB-205ENST00000559245 OAZ3Q9UMX2 235 aa12.6□□□□□ -0.39
CDC42BPB-205ENST00000559245 E9PI62 339 aa12.59□□□□□ -0.39
CDC42BPB-205ENST00000559245 IGLV1-40P01703 118 aa12.59□□□□□ -0.39
CDC42BPB-205ENST00000559245 FCGR1AP12314 374 aa12.59□□□□□ -0.39
CDC42BPB-205ENST00000559245 GP9P14770 177 aa12.59□□□□□ -0.39
CDC42BPB-205ENST00000559245 ZNF134P52741 427 aa12.59□□□□□ -0.39
CDC42BPB-205ENST00000559245 SNRPGP62308 76 aaKnown RBP12.59□□□□□ -0.39
CDC42BPB-205ENST00000559245 MMDQ15546 238 aa12.59□□□□□ -0.39
CDC42BPB-205ENST00000559245 ATAD3CQ5T2N8 411 aa12.59□□□□□ -0.39
CDC42BPB-205ENST00000559245 MEDAGQ5VYS4 303 aa12.59□□□□□ -0.39
CDC42BPB-205ENST00000559245 SYS1Q8N2H4 156 aa12.59□□□□□ -0.39
CDC42BPB-205ENST00000559245 ZNF439Q8NDP4 499 aa12.59□□□□□ -0.39
CDC42BPB-205ENST00000559245 NEK7Q8TDX7 302 aa12.59□□□□□ -0.39
CDC42BPB-205ENST00000559245 MYCBPQ99417 103 aaPredicted RBP12.59□□□□□ -0.39
CDC42BPB-205ENST00000559245 METTL9Q9H1A3 318 aa12.59□□□□□ -0.39
CDC42BPB-205ENST00000559245 TAS2R4Q9NYW5 299 aa12.59□□□□□ -0.39
CDC42BPB-205ENST00000559245 IL36GQ9NZH8 169 aa12.59□□□□□ -0.39
CDC42BPB-205ENST00000559245 ING4Q9UNL4 249 aa12.59□□□□□ -0.39
CDC42BPB-205ENST00000559245 TNCP24821 2201 aa12.58□□□□□ -0.39
CDC42BPB-205ENST00000559245 TRIM64CA6NLI5 447 aa12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 AIPO00170 330 aa12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 ATP6V0E1O15342 81 aa12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 MT-ND4P03905 459 aa12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 CSTBP04080 98 aaKnown RBP12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 SOX2P48431 317 aa12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 RAB9AP51151 201 aa12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 LSAMPQ13449 338 aa12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 CT45A1Q5HYN5 189 aa12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 ZNF497Q6ZNH5 498 aa12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 LINC00596Q86U02 117 aa12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 CT45A3Q8NHU0 189 aa12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 DLX4Q92988 240 aaPredicted RBP12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 JAM3Q9BX67 310 aa12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 ALX4Q9H161 411 aaPredicted RBP12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 OR51J1Q9H342 316 aa12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 PARP11Q9NR21 331 aa12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 CHCHD3Q9NX63 227 aaKnown RBP12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 GNG12Q9UBI6 72 aa12.58□□□□□ -0.4
CDC42BPB-205ENST00000559245 TRAV41A0A0B4J266 112 aa12.57□□□□□ -0.4
CDC42BPB-205ENST00000559245 FAM90A10PA6NDY2 464 aa12.57□□□□□ -0.4
CDC42BPB-205ENST00000559245 SAC3D1A6NKF1 404 aa12.57□□□□□ -0.4
CDC42BPB-205ENST00000559245 C12orf77C9JDV5 145 aa12.57□□□□□ -0.4
CDC42BPB-205ENST00000559245 ANKRD65E5RJM6 399 aa12.57□□□□□ -0.4
CDC42BPB-205ENST00000559245 SERPINA2P20848 420 aa12.57□□□□□ -0.4
CDC42BPB-205ENST00000559245 SLURP1P55000 103 aa12.57□□□□□ -0.4
CDC42BPB-205ENST00000559245 MRPL28Q13084 256 aaKnown RBP12.57□□□□□ -0.4
CDC42BPB-205ENST00000559245 MPV17LQ2QL34 196 aa12.57□□□□□ -0.4
CDC42BPB-205ENST00000559245 OR10V1Q8NGI7 309 aa12.57□□□□□ -0.4
CDC42BPB-205ENST00000559245 OR6Q1Q8NGQ2 317 aa12.57□□□□□ -0.4
CDC42BPB-205ENST00000559245 CENPNQ96H22 339 aaPredicted RBP12.57□□□□□ -0.4
CDC42BPB-205ENST00000559245 TM2D3Q9BRN9 247 aa12.57□□□□□ -0.4
CDC42BPB-205ENST00000559245 AASSQ9UDR5 926 aa12.57□□□□□ -0.4
CDC42BPB-205ENST00000559245 IGHV7-81A0A0B4J1V7 117 aa12.56□□□□□ -0.4
CDC42BPB-205ENST00000559245 SNTNA6NMZ2 147 aa12.56□□□□□ -0.4
CDC42BPB-205ENST00000559245 SPINT2O43291 252 aa12.56□□□□□ -0.4
CDC42BPB-205ENST00000559245 LANCL1O43813 399 aa12.56□□□□□ -0.4
CDC42BPB-205ENST00000559245 HLA-DRB1P01911 266 aa12.56□□□□□ -0.4
CDC42BPB-205ENST00000559245 CNTFRP26992 372 aa12.56□□□□□ -0.4
CDC42BPB-205ENST00000559245 GBX2P52951 348 aaPredicted RBP12.56□□□□□ -0.4
CDC42BPB-205ENST00000559245 ACTBP60709 375 aa12.56□□□□□ -0.4
CDC42BPB-205ENST00000559245 SRSF7Q16629 238 aaKnown RBP eCLIP12.56□□□□□ -0.4
CDC42BPB-205ENST00000559245 SYT6Q5T7P8 510 aaPredicted RBP12.56□□□□□ -0.4
CDC42BPB-205ENST00000559245 STX19Q8N4C7 294 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms