RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 PCM1Q15154 2024 aa1.4□□□□□ -2.19
GABPB1-209ENST00000559100 TRIOBPQ9H2D6 2365 aa1.4□□□□□ -2.19
GABPB1-209ENST00000559100 NACAE9PAV3 2078 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 CABIN1Q9Y6J0 2220 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 BAZ2AQ9UIF9 1905 aaKnown RBP1.39□□□□□ -2.19
GABPB1-209ENST00000559100 A0A0B4J2C4 111 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 IGLL5B9A064 214 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 RPL36A-HNRNPH2H7BZ11 118 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 K7EM74 188 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 M0R036 132 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 COPEO14579 308 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 EEF1E1O43324 174 aaKnown RBP1.39□□□□□ -2.19
GABPB1-209ENST00000559100 TGOLN2O43493 480 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 IFNA5P01569 189 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 CALB1P05937 261 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 OR4A8P0C604 315 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 OR13C7P0DN81 318 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 NEFHP12036 1026 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 GABRA1P14867 456 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 RPS12P25398 132 aaKnown RBP1.39□□□□□ -2.19
GABPB1-209ENST00000559100 CD79BP40259 229 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 INPP1P49441 399 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 LINC00315P59091 139 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 RBX1P62877 108 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 SLC35A2P78381 396 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 MRPS15P82914 257 aaKnown RBP1.39□□□□□ -2.19
GABPB1-209ENST00000559100 HPCAP84074 193 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 PDK2Q15119 407 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 LINC00303Q3SY05 128 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 LGALSLQ3ZCW2 172 aaPredicted RBP1.39□□□□□ -2.19
GABPB1-209ENST00000559100 SPIN4Q56A73 249 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 MRPL2Q5T653 305 aaKnown RBP1.39□□□□□ -2.19
GABPB1-209ENST00000559100 SPATA31B1PQ5VZV4 182 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 EBLN2Q6P2I7 272 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 TNFAIP8L2Q6P589 184 aaPredicted RBP1.39□□□□□ -2.19
GABPB1-209ENST00000559100 LRRN1Q6UXK5 716 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 FAM19A5Q7Z5A7 132 aaPredicted RBP1.39□□□□□ -2.19
GABPB1-209ENST00000559100 VN1R4Q7Z5H5 301 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 HMGN2P46Q86SG4 172 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 NAA40Q86UY6 237 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 NT5DC3Q86UY8 548 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 ZFP82Q8N141 532 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 TMEM156Q8N614 296 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 ZNF615Q8N8J6 731 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 ZNF680Q8NEM1 530 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 OR8J2Q8NGG1 315 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 OR9I1Q8NGQ6 314 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 OR10D3Q8NH80 312 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 MFSD8Q8NHS3 518 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 SLC37A2Q8TED4 501 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 RAB8BQ92930 207 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 TMBIM1Q969X1 311 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 TLCD1Q96CP7 247 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 RMI2Q96E14 147 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 PAIP2Q9BPZ3 127 aaKnown RBP1.39□□□□□ -2.19
GABPB1-209ENST00000559100 EIF5A2Q9GZV4 153 aaKnown RBP1.39□□□□□ -2.19
GABPB1-209ENST00000559100 GTSF1LQ9H1H1 148 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 FAM60AQ9NP50 221 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 LINC00527Q9UJ94 153 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 DNAJC12Q9UKB3 198 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 SLIT3O75094 1523 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 NOS1P29475 1434 aa1.39□□□□□ -2.19
GABPB1-209ENST00000559100 ANKRD12Q6UB98 2062 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 IGHV3-43A0A0B4J1X8 118 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 GOLGA6L4A6NEF3 574 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 ZNF729A6NN14 1252 aaPredicted RBP1.38□□□□□ -2.19
GABPB1-209ENST00000559100 TMEM250H0YL14 139 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 CXCR6O00574 342 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 MRASO14807 208 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 STK16O75716 305 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 LYPLA2O95372 231 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 IGKV1D-33P01593 117 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 IGKV1-33P01594 117 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 CRYBA1P05813 215 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 PFN1P07737 140 aaKnown RBP1.38□□□□□ -2.19
GABPB1-209ENST00000559100 RPS17P08708 135 aaKnown RBP1.38□□□□□ -2.19
GABPB1-209ENST00000559100 OR12D1P0DN82 309 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 CTSEP14091 401 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 CXCL2P19875 107 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 CXCL3P19876 107 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 CNTFRP26992 372 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 RPL12P30050 165 aaKnown RBP1.38□□□□□ -2.19
GABPB1-209ENST00000559100 EVI2BP34910 448 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 TGFBR2P37173 567 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 PSMB3P49720 205 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 NKX2-5P52952 324 aaPredicted RBP1.38□□□□□ -2.19
GABPB1-209ENST00000559100 TCL1AP56279 114 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 H2BFSP57053 126 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 KLF3P57682 345 aaPredicted RBP1.38□□□□□ -2.19
GABPB1-209ENST00000559100 C1QTNF8P60827 252 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 STX5Q13190 355 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 FAM53BQ14153 422 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 RSU1Q15404 277 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 MESTQ5EB52 335 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 DNLZQ5SXM8 178 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 CLVS2Q5SYC1 327 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 LDLRAD2Q5SZI1 272 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 HES3Q5TGS1 186 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 C8orf74Q6P047 294 aa1.38□□□□□ -2.19
GABPB1-209ENST00000559100 SPINT4Q6UDR6 99 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms