RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 CT45A3Q8NHU0 189 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 CPNE2Q96FN4 548 aaPredicted RBP10.65□□□□□ -0.7
VPS18-203ENST00000558855 TMEM80Q96HE8 168 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 RCC1LQ96I51 464 aaKnown RBP10.65□□□□□ -0.7
VPS18-203ENST00000558855 RDH12Q96NR8 316 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 DERL3Q96Q80 235 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 P2RX4Q99571 388 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 KCNK15Q9H427 330 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 PCDHB16Q9NRJ7 776 aa10.65□□□□□ -0.7
VPS18-203ENST00000558855 MRPS28Q9Y2Q9 187 aaKnown RBP10.65□□□□□ -0.7
VPS18-203ENST00000558855 RPLP1P05386 114 aaKnown RBP10.64□□□□□ -0.71
VPS18-203ENST00000558855 GPR12P47775 334 aa10.64□□□□□ -0.71
VPS18-203ENST00000558855 F2RL1P55085 397 aa10.64□□□□□ -0.71
VPS18-203ENST00000558855 ST3GAL4Q11206 333 aa10.64□□□□□ -0.71
VPS18-203ENST00000558855 FAM27D1Q5T7N8 215 aa10.64□□□□□ -0.71
VPS18-203ENST00000558855 SLC16A12Q6ZSM3 486 aa10.64□□□□□ -0.71
VPS18-203ENST00000558855 GAPTQ8N292 157 aa10.64□□□□□ -0.71
VPS18-203ENST00000558855 JAGN1Q8N5M9 183 aa10.64□□□□□ -0.71
VPS18-203ENST00000558855 KLHL30-AS1Q8NEE0 82 aa10.64□□□□□ -0.71
VPS18-203ENST00000558855 NEK7Q8TDX7 302 aa10.64□□□□□ -0.71
VPS18-203ENST00000558855 RAX2Q96IS3 184 aa10.64□□□□□ -0.71
VPS18-203ENST00000558855 MYCBPQ99417 103 aaPredicted RBP10.64□□□□□ -0.71
VPS18-203ENST00000558855 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.64□□□□□ -0.71
VPS18-203ENST00000558855 H3BUI4 141 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 ORC5O43913 435 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 HBZP02008 142 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 MAS1P04201 325 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 GAPDHP04406 335 aaKnown RBP10.63□□□□□ -0.71
VPS18-203ENST00000558855 GTF2F2P13984 249 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 SNRPBP14678 240 aaKnown RBP10.63□□□□□ -0.71
VPS18-203ENST00000558855 GZMHP20718 246 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 CFHR3Q02985 330 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 YIF1BQ5BJH7 314 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 SYT6Q5T7P8 510 aaPredicted RBP10.63□□□□□ -0.71
VPS18-203ENST00000558855 RAB12Q6IQ22 244 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 SLC25A48Q6ZT89 311 aaKnown RBP10.63□□□□□ -0.71
VPS18-203ENST00000558855 LINC00596Q86U02 117 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 ODF3L1Q8IXM7 274 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 PRR18Q8N4B5 295 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 OR52M1Q8NGK5 317 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 CHPT1Q8WUD6 406 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 FBLIM1Q8WUP2 373 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 RITA1Q96K30 269 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 Q96M66 194 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 ABCG5Q9H222 651 aa10.63□□□□□ -0.71
VPS18-203ENST00000558855 DNAH7Q8WXX0 4024 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 UBE2QL1A1L167 161 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 MGMTP16455 207 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 MYL12AP19105 171 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 CNTFRP26992 372 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 ZNF137PP52743 207 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 RCN1Q15293 331 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 OR10K2Q6IF99 312 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 AHSA2Q719I0 299 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 TGIF2LXQ8IUE1 241 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 FAM71E2Q8N5Q1 922 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 C8orf31Q8N9H6 132 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 OR52L2PQ8NGH6 319 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 MRPL30Q8TCC3 161 aaKnown RBP10.62□□□□□ -0.71
VPS18-203ENST00000558855 FAM46BQ96A09 425 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 S1PR3Q99500 378 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 FKBP14Q9NWM8 211 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 ETAA1Q9NY74 926 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 PSORS1C1Q9UIG5 152 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 PEX16Q9Y5Y5 336 aa10.62□□□□□ -0.71
VPS18-203ENST00000558855 NCBP2LA6PVI3 153 aaKnown RBP10.61□□□□□ -0.71
VPS18-203ENST00000558855 NUDT19A8MXV4 375 aa10.61□□□□□ -0.71
VPS18-203ENST00000558855 EBAG9O00559 213 aa10.61□□□□□ -0.71
VPS18-203ENST00000558855 SC5DO75845 299 aa10.61□□□□□ -0.71
VPS18-203ENST00000558855 C6orf141Q5SZD1 244 aa10.61□□□□□ -0.71
VPS18-203ENST00000558855 AWAT2Q6E213 333 aa10.61□□□□□ -0.71
VPS18-203ENST00000558855 DHRSXQ8N5I4 330 aa10.61□□□□□ -0.71
VPS18-203ENST00000558855 OR2T10Q8NGZ9 312 aa10.61□□□□□ -0.71
VPS18-203ENST00000558855 S100A13Q99584 98 aa10.61□□□□□ -0.71
VPS18-203ENST00000558855 SELENOIQ9C0D9 397 aa10.61□□□□□ -0.71
VPS18-203ENST00000558855 LIN7CQ9NUP9 197 aaKnown RBP10.61□□□□□ -0.71
VPS18-203ENST00000558855 PAK1IP1Q9NWT1 392 aaPredicted RBP10.61□□□□□ -0.71
VPS18-203ENST00000558855 TRAPPC2LQ9UL33 140 aa10.61□□□□□ -0.71
VPS18-203ENST00000558855 IRGMA1A4Y4 181 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 MCRIP1C9JLW8 97 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 ANKRD65E5RJM6 399 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 H0YHG0 523 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 ZNF780AO75290 641 aaPredicted RBP10.6□□□□□ -0.71
VPS18-203ENST00000558855 MOSP00540 346 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 CELP19835 753 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 CD1BP29016 333 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 PPP1CCP36873 323 aaKnown RBP10.6□□□□□ -0.71
VPS18-203ENST00000558855 CAPGP40121 348 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 LUMP51884 338 aaPredicted RBP10.6□□□□□ -0.71
VPS18-203ENST00000558855 LSAMPQ13449 338 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 DEFB121Q5J5C9 76 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 TTC23Q5W5X9 447 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 LRRTM1Q86UE6 522 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 ZNF695Q8IW36 515 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 C10orf67Q8IYJ2 551 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 NANOGP1Q8N7R0 232 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 TFAP2CQ92754 450 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 SULT4A1Q9BR01 284 aa10.6□□□□□ -0.71
VPS18-203ENST00000558855 MRPL20Q9BYC9 149 aaKnown RBP10.6□□□□□ -0.71
VPS18-203ENST00000558855 PARP12Q9H0J9 701 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms