RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 OR51D1Q8NGF3 324 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 OR10X1Q8NGY0 326 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 PLPPR1Q8TBJ4 325 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 NEK7Q8TDX7 302 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 DPCDQ9BVM2 203 aaPredicted RBP6.41□□□□□ -1.38
TRAF3-205ENST00000558700 GPR61Q9BZJ8 451 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 RAB9BQ9NP90 201 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 AURKAIP1Q9NWT8 199 aaPredicted RBP6.41□□□□□ -1.38
TRAF3-205ENST00000558700 PSG11Q9UQ72 335 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 ST3GAL6Q9Y274 331 aa6.41□□□□□ -1.38
TRAF3-205ENST00000558700 EXOSC1Q9Y3B2 195 aaKnown RBP6.41□□□□□ -1.38
TRAF3-205ENST00000558700 TRBV5-5A0A0J9YX44 114 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 PSMB11A5LHX3 300 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 SH2D7A6NKC9 451 aaPredicted RBP6.4□□□□□ -1.38
TRAF3-205ENST00000558700 NPIPB11E5RHQ5 1161 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 EBAG9O00559 213 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 HSD17B6O14756 317 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 WBP4O75554 376 aaKnown RBP6.4□□□□□ -1.38
TRAF3-205ENST00000558700 CDRT1O95170 752 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 AMY1AP04745 511 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 GYPEP15421 78 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 SERPINA2P20848 420 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 LOXL3P58215 753 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 TAS2R43P59537 309 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 ZNF816Q0VGE8 651 aaPredicted RBP6.4□□□□□ -1.38
TRAF3-205ENST00000558700 GPR176Q14439 515 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 SMN1Q16637 294 aaKnown RBP6.4□□□□□ -1.38
TRAF3-205ENST00000558700 LTC4SQ16873 150 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 Q499Y3 187 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 YIF1BQ5BJH7 314 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 OR2G6Q5TZ20 316 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 IZUMO1Q8IYV9 350 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 STX19Q8N4C7 294 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 DRAM1Q8N682 238 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 C5orf56Q8N8D9 126 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 OR52N1Q8NH53 320 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 CHPT1Q8WUD6 406 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 CYGBQ8WWM9 190 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 THRSPQ92748 146 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 DPF1Q92782 380 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 LEAP2Q969E1 77 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 SPACA1Q9HBV2 294 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 C8orf4Q9NR00 106 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 CHCHD3Q9NX63 227 aaKnown RBP6.4□□□□□ -1.38
TRAF3-205ENST00000558700 DIMT1Q9UNQ2 313 aaKnown RBP6.4□□□□□ -1.38
TRAF3-205ENST00000558700 NOTCH3Q9UM47 2321 aa6.4□□□□□ -1.38
TRAF3-205ENST00000558700 FAM90A18PA6NE21 464 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 FAM90A16PA6NEW6 464 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 FAM90A20PA6NIJ5 464 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 FAM90A9PA6NNJ1 464 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 SERPINE3A8MV23 424 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 FAM90A12PA8MX19 464 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 FAM90A5PA8MXJ8 464 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 AIPO00170 330 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 CCRL2O00421 344 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 SDCBPO00560 298 aaPredicted RBP6.39□□□□□ -1.39
TRAF3-205ENST00000558700 GEMIN2O14893 280 aaKnown RBP6.39□□□□□ -1.39
TRAF3-205ENST00000558700 MYL12BO14950 172 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 TXNL1O43396 289 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 BAG2O95816 211 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 IGKV1D-33P01593 117 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 IGKV1-33P01594 117 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 IGHV3-7P01780 117 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 CD1AP06126 327 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 FAM90A15PP0C7V4 464 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 FAM90A13PP0C7W8 464 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 FAM90A14PP0C7W9 464 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 FAM90A24PP0C7X0 464 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 GTF2F2P13984 249 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 IGLL1P15814 213 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 GZMHP20718 246 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 SLC6A1P30531 599 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 RPS16P62249 146 aaKnown RBP6.39□□□□□ -1.39
TRAF3-205ENST00000558700 SLC35B1P78383 322 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 RAB32Q13637 225 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 TMEM30BQ3MIR4 351 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 Q3ZCU0 254 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 SLC22A6Q4U2R8 563 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 TCTEX1D4Q5JR98 221 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 UTF1Q5T230 341 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 ATAD3CQ5T2N8 411 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 TTC23Q5W5X9 447 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 SLC35E3Q7Z769 313 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 FOXRED2Q8IWF2 684 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 COMMD1Q8N668 190 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 PACRGLQ8N7B6 248 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 C8orf31Q8N9H6 132 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 WFDC9Q8NEX5 89 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 OR52M1Q8NGK5 317 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 OR13C5Q8NGS8 318 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 RFESDQ8TAC1 157 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 ZNF184Q99676 751 aaPredicted RBP6.39□□□□□ -1.39
TRAF3-205ENST00000558700 ING4Q9UNL4 249 aa6.39□□□□□ -1.39
TRAF3-205ENST00000558700 IGHV1-3A0A0C4DH29 117 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 EFCAB10A6NFE3 127 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 OGG1O15527 345 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 ORC5O43913 435 aa6.38□□□□□ -1.39
TRAF3-205ENST00000558700 GAPDHP04406 335 aaKnown RBP6.38□□□□□ -1.39
TRAF3-205ENST00000558700 IGFBP3P17936 291 aaPredicted RBP6.38□□□□□ -1.39
TRAF3-205ENST00000558700 MAPK3P27361 379 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms