RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 ACTR3P61158 418 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 PAX5Q02548 391 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 CDK5R1Q15078 307 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 ECSCRQ19T08 205 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 C4orf46Q504U0 113 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 RSBN1Q5VWQ0 802 aaPredicted RBP5.12□□□□□ -1.59
LRRC28-207ENST00000558500 LGALS9CQ6DKI2 356 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 LCN12Q6JVE5 192 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 IL34Q6ZMJ4 242 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 Q8N402 240 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 C8orf31Q8N9H6 132 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 CCDC54Q8NEL0 328 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 OR10G2Q8NGC3 310 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 PLPPR1Q8TBJ4 325 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 C10orf35Q96D05 121 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 CNN2Q99439 309 aaKnown RBP5.12□□□□□ -1.59
LRRC28-207ENST00000558500 ARPC5LQ9BPX5 153 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 BARHL1Q9BZE3 327 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 RHOFQ9HBH0 211 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 SLC25A19Q9HC21 320 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 FGFR1OP2Q9NVK5 253 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 FOXA2Q9Y261 457 aaPredicted RBP5.12□□□□□ -1.59
LRRC28-207ENST00000558500 FBXO7Q9Y3I1 522 aa5.12□□□□□ -1.59
LRRC28-207ENST00000558500 SAMHD1Q9Y3Z3 626 aaKnown RBP5.12□□□□□ -1.59
LRRC28-207ENST00000558500 DNAH2Q9P225 4427 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 DNAH17Q9UFH2 4485 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 TRAV39A0A0B4J263 110 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 TRAV24A0A0B4J272 114 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 A0A1W2PN81 502 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 H0YJX3 145 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 HSPB6O14558 160 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 TPPPO94811 219 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 RPP14O95059 124 aaKnown RBP5.11□□□□□ -1.59
LRRC28-207ENST00000558500 HSD17B1P14061 328 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 ATF1P18846 271 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 CHRNA7P36544 502 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 ZNF137PP52743 207 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 CD81P60033 236 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 NDPQ00604 133 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 C5orf64Q2M2E5 130 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 PAN3Q58A45 887 aaKnown RBP5.11□□□□□ -1.59
LRRC28-207ENST00000558500 PYHIN1Q6K0P9 492 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 FAHD1Q6P587 224 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 UTS2BQ765I0 119 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 SLC35F2Q8IXU6 374 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 SAXO1Q8IYX7 474 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 RDH10Q8IZV5 341 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 DEFB125Q8N687 156 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 TCTEX1D1Q8N7M0 179 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 OR52M1Q8NGK5 317 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 OR9G4Q8NGQ1 327 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 RGP1Q92546 391 aaPredicted RBP5.11□□□□□ -1.59
LRRC28-207ENST00000558500 RFT1Q96AA3 541 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 SPSB1Q96BD6 273 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 ADAT3Q96EY9 351 aaPredicted RBP5.11□□□□□ -1.59
LRRC28-207ENST00000558500 RITA1Q96K30 269 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 OPALINQ96PE5 141 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 FEVQ99581 238 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 ADI1Q9BV57 179 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 ANKRD60Q9BZ19 345 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 REEP1Q9H902 201 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 FAM118AQ9NWS6 357 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 ERGIC3Q9Y282 383 aa5.11□□□□□ -1.59
LRRC28-207ENST00000558500 KLK5Q9Y337 293 aaPredicted RBP5.11□□□□□ -1.59
LRRC28-207ENST00000558500 PKHD1P08F94 4074 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 LOC107986453A0A1B0GWG9 222 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 IZUMO1RA6ND01 250 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 ZNF670-ZNF695F2Z2N8 137 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 C15orf65H3BRN8 121 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 SDCBPO00560 298 aaPredicted RBP5.1□□□□□ -1.59
LRRC28-207ENST00000558500 SLC31A2O15432 143 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 NBR2O15453 112 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 APOL3O95236 402 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 CSN3P07498 182 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 GZMHP20718 246 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 ZP3P21754 424 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 KCNJ3P48549 501 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 ACTBP60709 375 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 CDK5Q00535 292 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 EWSR1Q01844 656 aaKnown RBP eCLIP5.1□□□□□ -1.59
LRRC28-207ENST00000558500 KLF5Q13887 457 aaPredicted RBP5.1□□□□□ -1.59
LRRC28-207ENST00000558500 LRRC36Q1X8D7 754 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 Q3ZCU0 254 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 OR2T5Q6IEZ7 315 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 LIN54Q6MZP7 749 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 SLC25A48Q6ZT89 311 aaKnown RBP5.1□□□□□ -1.59
LRRC28-207ENST00000558500 OR5D18Q8NGL1 313 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 OR2T29Q8NH02 315 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 CNIH3Q8TBE1 160 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 MS4A10Q96PG2 267 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 NEURL2Q9BR09 285 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 ZNF251Q9BRH9 671 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 OVOL2Q9BRP0 275 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 KRTAP4-5Q9BYR2 181 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 CST11Q9H112 138 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 NEK6Q9HC98 313 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 RANGRFQ9HD47 186 aaPredicted RBP5.1□□□□□ -1.59
LRRC28-207ENST00000558500 CLN6Q9NWW5 311 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 ETAA1Q9NY74 926 aa5.1□□□□□ -1.59
LRRC28-207ENST00000558500 SIGLEC8Q9NYZ4 499 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms