RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 HTR1AP08908 422 aa13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 RBMY1DP0C7P1 496 aaKnown RBP13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 CHRNA7P36544 502 aa13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 ECSCRQ19T08 205 aa13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 PIGYQ3MUY2 71 aa13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 Q3ZCU0 254 aa13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 C12orf73Q69YU5 71 aa13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 SLC25A48Q6ZT89 311 aaKnown RBP13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 SATL1Q86VE3 508 aa13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 OR51A4Q8NGJ6 313 aa13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 CCDC107Q8WV48 283 aa13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 RBMXL1Q96E39 390 aaKnown RBP13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 TMED9Q9BVK6 235 aa13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 RAB9BQ9NP90 201 aa13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 GNG12Q9UBI6 72 aa13.71□□□□□ -0.21
TSPAN3-204ENST00000558394 ZAR1LA6NP61 321 aa13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 C15orf65H3BRN8 121 aa13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 ATP8B1O43520 1251 aa13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 SULT1B1O43704 296 aa13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 OR7C1O76099 320 aaPredicted RBP13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 HTR3BO95264 441 aa13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 BLVRBP30043 206 aaPredicted RBP13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 ZNF85Q03923 595 aa13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 LPCAT4Q643R3 524 aa13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 LIN54Q6MZP7 749 aa13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 KCTD20Q7Z5Y7 419 aa13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 GTSCR1Q86UQ5 136 aa13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 SERPINA12Q8IW75 414 aa13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 MINDY2Q8NBR6 621 aa13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 NEK7Q8TDX7 302 aa13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 TNFAIP8L1Q8WVP5 186 aa13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 NSL1Q96IY1 281 aa13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 CST11Q9H112 138 aa13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 KIAA1456Q9P272 454 aa13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 FOXA2Q9Y261 457 aaPredicted RBP13.7□□□□□ -0.22
TSPAN3-204ENST00000558394 IGHV7-81A0A0B4J1V7 117 aa13.69□□□□□ -0.22
TSPAN3-204ENST00000558394 C12orf77C9JDV5 145 aa13.69□□□□□ -0.22
TSPAN3-204ENST00000558394 ORC5O43913 435 aa13.69□□□□□ -0.22
TSPAN3-204ENST00000558394 FKBP6O75344 327 aa13.69□□□□□ -0.22
TSPAN3-204ENST00000558394 IGLV1-51P01701 117 aa13.69□□□□□ -0.22
TSPAN3-204ENST00000558394 CCR9P51686 369 aa13.69□□□□□ -0.22
TSPAN3-204ENST00000558394 ZNF137PP52743 207 aa13.69□□□□□ -0.22
TSPAN3-204ENST00000558394 ACTBP60709 375 aa13.69□□□□□ -0.22
TSPAN3-204ENST00000558394 GNGT1P63211 74 aa13.69□□□□□ -0.22
TSPAN3-204ENST00000558394 LSAMPQ13449 338 aa13.69□□□□□ -0.22
TSPAN3-204ENST00000558394 SPATA24Q86W54 205 aa13.69□□□□□ -0.22
TSPAN3-204ENST00000558394 OR10K1Q8NGX5 313 aa13.69□□□□□ -0.22
TSPAN3-204ENST00000558394 RFKQ969G6 155 aa13.69□□□□□ -0.22
TSPAN3-204ENST00000558394 ANKRD60Q9BZ19 345 aa13.69□□□□□ -0.22
TSPAN3-204ENST00000558394 TPSG1Q9NRR2 321 aa13.69□□□□□ -0.22
TSPAN3-204ENST00000558394 ENOPH1Q9UHY7 261 aa13.69□□□□□ -0.22
TSPAN3-204ENST00000558394 H0Y980 276 aa13.68□□□□□ -0.22
TSPAN3-204ENST00000558394 SLC31A2O15432 143 aa13.68□□□□□ -0.22
TSPAN3-204ENST00000558394 NBR2O15453 112 aa13.68□□□□□ -0.22
TSPAN3-204ENST00000558394 SPINT2O43291 252 aa13.68□□□□□ -0.22
TSPAN3-204ENST00000558394 MITFO75030 526 aaPredicted RBP13.68□□□□□ -0.22
TSPAN3-204ENST00000558394 IGHV3-11P01762 117 aa13.68□□□□□ -0.22
TSPAN3-204ENST00000558394 CD40LGP29965 261 aa13.68□□□□□ -0.22
TSPAN3-204ENST00000558394 NANOS3P60323 173 aaKnown RBP13.68□□□□□ -0.22
TSPAN3-204ENST00000558394 TMED1Q13445 227 aa13.68□□□□□ -0.22
TSPAN3-204ENST00000558394 PYHIN1Q6K0P9 492 aa13.68□□□□□ -0.22
TSPAN3-204ENST00000558394 FDX2Q6P4F2 183 aa13.68□□□□□ -0.22
TSPAN3-204ENST00000558394 STX19Q8N4C7 294 aa13.68□□□□□ -0.22
TSPAN3-204ENST00000558394 TCTEX1D1Q8N7M0 179 aa13.68□□□□□ -0.22
TSPAN3-204ENST00000558394 ABHD5Q8WTS1 349 aa13.68□□□□□ -0.22
TSPAN3-204ENST00000558394 CASTOR1Q8WTX7 329 aa13.68□□□□□ -0.22
TSPAN3-204ENST00000558394 ST3GAL6Q9Y274 331 aa13.68□□□□□ -0.22
TSPAN3-204ENST00000558394 PLECQ15149 4684 aaKnown RBP13.67□□□□□ -0.22
TSPAN3-204ENST00000558394 AIPO00170 330 aa13.67□□□□□ -0.22
TSPAN3-204ENST00000558394 LANCL1O43813 399 aa13.67□□□□□ -0.22
TSPAN3-204ENST00000558394 EPHA2P29317 976 aa13.67□□□□□ -0.22
TSPAN3-204ENST00000558394 TMEM267Q0VDI3 215 aaPredicted RBP13.67□□□□□ -0.22
TSPAN3-204ENST00000558394 C5orf64Q2M2E5 130 aa13.67□□□□□ -0.22
TSPAN3-204ENST00000558394 ATAD3CQ5T2N8 411 aa13.67□□□□□ -0.22
TSPAN3-204ENST00000558394 OR10V1Q8NGI7 309 aa13.67□□□□□ -0.22
TSPAN3-204ENST00000558394 DDB2Q92466 427 aa13.67□□□□□ -0.22
TSPAN3-204ENST00000558394 RNF150Q9ULK6 438 aa13.67□□□□□ -0.22
TSPAN3-204ENST00000558394 DHDHQ9UQ10 334 aa13.67□□□□□ -0.22
TSPAN3-204ENST00000558394 A3GALT2U3KPV4 340 aa13.67□□□□□ -0.22
TSPAN3-204ENST00000558394 DAPL1A0PJW8 107 aa13.66□□□□□ -0.22
TSPAN3-204ENST00000558394 GABRPO00591 440 aa13.66□□□□□ -0.22
TSPAN3-204ENST00000558394 RPSAP08865 295 aaKnown RBP13.66□□□□□ -0.22
TSPAN3-204ENST00000558394 RAB3AP20336 220 aa13.66□□□□□ -0.22
TSPAN3-204ENST00000558394 VHLP40337 213 aa13.66□□□□□ -0.22
TSPAN3-204ENST00000558394 GYS2P54840 703 aa13.66□□□□□ -0.22
TSPAN3-204ENST00000558394 ALKBH1Q13686 389 aaKnown RBP13.66□□□□□ -0.22
TSPAN3-204ENST00000558394 TMEM30BQ3MIR4 351 aa13.66□□□□□ -0.22
TSPAN3-204ENST00000558394 CT45A1Q5HYN5 189 aa13.66□□□□□ -0.22
TSPAN3-204ENST00000558394 PRR18Q8N4B5 295 aa13.66□□□□□ -0.22
TSPAN3-204ENST00000558394 CT45A3Q8NHU0 189 aa13.66□□□□□ -0.22
TSPAN3-204ENST00000558394 S100A13Q99584 98 aa13.66□□□□□ -0.22
TSPAN3-204ENST00000558394 THTPAQ9BU02 230 aa13.66□□□□□ -0.22
TSPAN3-204ENST00000558394 IFT22Q9H7X7 185 aa13.66□□□□□ -0.22
TSPAN3-204ENST00000558394 TRAPPC2LQ9UL33 140 aa13.66□□□□□ -0.22
TSPAN3-204ENST00000558394 J3QLW9 94 aa13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 SLC16A6O15403 523 aa13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 LY6G6CO95867 125 aa13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 ZNF19P17023 458 aa13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 CALB2P22676 271 aa13.65□□□□□ -0.22
TSPAN3-204ENST00000558394 CNTFRP26992 372 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms