RNA–Protein interactions for RNA: ENST00000557845.1

NEDD4-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-212ENST00000557845 OR56B4Q8NH76 319 aa13.32□□□□□ -0.28
NEDD4-212ENST00000557845 UFD1Q92890 307 aa13.32□□□□□ -0.28
NEDD4-212ENST00000557845 FAM46BQ96A09 425 aa13.32□□□□□ -0.28
NEDD4-212ENST00000557845 CITED2Q99967 270 aaPredicted RBP13.32□□□□□ -0.28
NEDD4-212ENST00000557845 CST11Q9H112 138 aa13.32□□□□□ -0.28
NEDD4-212ENST00000557845 GFOD1Q9NXC2 390 aa13.32□□□□□ -0.28
NEDD4-212ENST00000557845 MEGF8Q7Z7M0 2845 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 IGHV3-43A0A0B4J1X8 118 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 UBE2QL1A1L167 161 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 C12orf77C9JDV5 145 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 CA11O75493 328 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 UCHL1P09936 223 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 UBBP0CG47 229 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 HSMCR30P0CW71 290 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 IGHV3-43DP0DP04 118 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 CD37P11049 281 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 CRHBPP24387 322 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 TPBGQ13641 420 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 NSUN5P1Q3KNT7 163 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 HSD17B12Q53GQ0 312 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 CENPVQ7Z7K6 275 aaPredicted RBP13.31□□□□□ -0.28
NEDD4-212ENST00000557845 NDUFA11Q86Y39 141 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 LINC00311Q8N616 119 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 C8orf31Q8N9H6 132 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 OR5AU1Q8NGC0 362 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 TMEM203Q969S6 136 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 CCDC90BQ9GZT6 254 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 ISYNA1Q9NPH2 558 aa13.31□□□□□ -0.28
NEDD4-212ENST00000557845 SH2D7A6NKC9 451 aaPredicted RBP13.3□□□□□ -0.28
NEDD4-212ENST00000557845 HSD17B6O14756 317 aa13.3□□□□□ -0.28
NEDD4-212ENST00000557845 SPINT2O43291 252 aa13.3□□□□□ -0.28
NEDD4-212ENST00000557845 MPIG6BO95866 241 aa13.3□□□□□ -0.28
NEDD4-212ENST00000557845 OPN1MWP04001 364 aa13.3□□□□□ -0.28
NEDD4-212ENST00000557845 GAPDHP04406 335 aaKnown RBP13.3□□□□□ -0.28
NEDD4-212ENST00000557845 OPN1MW2P0DN77 364 aa13.3□□□□□ -0.28
NEDD4-212ENST00000557845 OPN1MW3P0DN78 364 aa13.3□□□□□ -0.28
NEDD4-212ENST00000557845 VSIG8P0DPA2 414 aa13.3□□□□□ -0.28
NEDD4-212ENST00000557845 RCC1P18754 421 aaPredicted RBP13.3□□□□□ -0.28
NEDD4-212ENST00000557845 ZNF816Q0VGE8 651 aaPredicted RBP13.3□□□□□ -0.28
NEDD4-212ENST00000557845 HES1Q14469 280 aa13.3□□□□□ -0.28
NEDD4-212ENST00000557845 Q3ZCU0 254 aa13.3□□□□□ -0.28
NEDD4-212ENST00000557845 C6orf183Q5T699 404 aa13.3□□□□□ -0.28
NEDD4-212ENST00000557845 OR10K2Q6IF99 312 aa13.3□□□□□ -0.28
NEDD4-212ENST00000557845 IZUMO2Q6UXV1 221 aa13.3□□□□□ -0.28
NEDD4-212ENST00000557845 TMEM91Q6ZNR0 172 aa13.3□□□□□ -0.28
NEDD4-212ENST00000557845 PRSS48Q7RTY5 328 aa13.3□□□□□ -0.28
NEDD4-212ENST00000557845 CYYR1Q96J86 154 aa13.3□□□□□ -0.28
NEDD4-212ENST00000557845 RAB9BQ9NP90 201 aa13.3□□□□□ -0.28
NEDD4-212ENST00000557845 MOB4Q9Y3A3 225 aa13.3□□□□□ -0.28
NEDD4-212ENST00000557845 IGHV1-3A0A0C4DH29 117 aa13.29□□□□□ -0.28
NEDD4-212ENST00000557845 ADARB2-AS1A8MUL3 147 aa13.29□□□□□ -0.28
NEDD4-212ENST00000557845 CCRL2O00421 344 aa13.29□□□□□ -0.28
NEDD4-212ENST00000557845 PDCD6O75340 191 aa13.29□□□□□ -0.28
NEDD4-212ENST00000557845 HBZP02008 142 aa13.29□□□□□ -0.28
NEDD4-212ENST00000557845 TMEM11P17152 192 aa13.29□□□□□ -0.28
NEDD4-212ENST00000557845 HTR2CP28335 458 aa13.29□□□□□ -0.28
NEDD4-212ENST00000557845 HSPA13P48723 471 aa13.29□□□□□ -0.28
NEDD4-212ENST00000557845 MLLT11Q13015 90 aaPredicted RBP13.29□□□□□ -0.28
NEDD4-212ENST00000557845 HNF4GQ14541 408 aa13.29□□□□□ -0.28
NEDD4-212ENST00000557845 TRAM1Q15629 374 aa13.29□□□□□ -0.28
NEDD4-212ENST00000557845 PDLIM3Q53GG5 364 aaPredicted RBP13.29□□□□□ -0.28
NEDD4-212ENST00000557845 C9orf152Q5JTZ5 239 aa13.29□□□□□ -0.28
NEDD4-212ENST00000557845 TRAT1Q6PIZ9 186 aa13.29□□□□□ -0.28
NEDD4-212ENST00000557845 MOB3BQ86TA1 216 aa13.29□□□□□ -0.28
NEDD4-212ENST00000557845 PRR18Q8N4B5 295 aa13.29□□□□□ -0.28
NEDD4-212ENST00000557845 ST6GALNAC6Q969X2 333 aa13.29□□□□□ -0.28
NEDD4-212ENST00000557845 MBNL3Q9NUK0 354 aaKnown RBP13.29□□□□□ -0.28
NEDD4-212ENST00000557845 SLC22A1O15245 554 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 IGKV1D-33P01593 117 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 IGKV1-33P01594 117 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 CPEP16870 476 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 MAP2K4P45985 399 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 REG1BP48304 166 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 ZNF134P52741 427 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 RPS25P62851 125 aaKnown RBP13.28□□□□□ -0.28
NEDD4-212ENST00000557845 RPS27AP62979 156 aaKnown RBP13.28□□□□□ -0.28
NEDD4-212ENST00000557845 CD83Q01151 205 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 EBI3Q14213 229 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 TMEM30BQ3MIR4 351 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 C1QL4Q86Z23 238 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 ZNF439Q8NDP4 499 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 OR1L1Q8NH94 360 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 KCNG3Q8TAE7 436 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 MRPL30Q8TCC3 161 aaKnown RBP13.28□□□□□ -0.28
NEDD4-212ENST00000557845 CNBD2Q96M20 576 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 NEDD4LQ96PU5 975 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 MGLLQ99685 303 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 TAF9BQ9HBM6 251 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 KCNIP1Q9NZI2 227 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 GNG12Q9UBI6 72 aa13.28□□□□□ -0.28
NEDD4-212ENST00000557845 PLXNB1O43157 2135 aa13.27□□□□□ -0.28
NEDD4-212ENST00000557845 TMEM14DPA8MWL7 114 aa13.27□□□□□ -0.29
NEDD4-212ENST00000557845 SLC31A2O15432 143 aa13.27□□□□□ -0.29
NEDD4-212ENST00000557845 PSMA1P25786 263 aaKnown RBP13.27□□□□□ -0.29
NEDD4-212ENST00000557845 IL3RAP26951 378 aa13.27□□□□□ -0.29
NEDD4-212ENST00000557845 CHATP28329 748 aa13.27□□□□□ -0.29
NEDD4-212ENST00000557845 QRFPP83859 136 aa13.27□□□□□ -0.29
NEDD4-212ENST00000557845 UNC119Q13432 240 aa13.27□□□□□ -0.29
NEDD4-212ENST00000557845 CT45A1Q5HYN5 189 aa13.27□□□□□ -0.29
NEDD4-212ENST00000557845 NKAPLQ5M9Q1 402 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms