RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 PRR18Q8N4B5 295 aa10.96□□□□□ -0.65
SLIRP-210ENST00000557431 FAM71E2Q8N5Q1 922 aa10.96□□□□□ -0.65
SLIRP-210ENST00000557431 OR10A7Q8NGE5 316 aa10.96□□□□□ -0.65
SLIRP-210ENST00000557431 OR13C5Q8NGS8 318 aa10.96□□□□□ -0.65
SLIRP-210ENST00000557431 CASTOR1Q8WTX7 329 aa10.96□□□□□ -0.65
SLIRP-210ENST00000557431 RITA1Q96K30 269 aa10.96□□□□□ -0.65
SLIRP-210ENST00000557431 JAM3Q9BX67 310 aa10.96□□□□□ -0.65
SLIRP-210ENST00000557431 ISYNA1Q9NPH2 558 aa10.96□□□□□ -0.65
SLIRP-210ENST00000557431 MAGEA13PA6NCF6 341 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 TMEM212A6NML5 194 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 BAG2O95816 211 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 RPSAP08865 295 aaKnown RBP10.95□□□□□ -0.66
SLIRP-210ENST00000557431 CD1BP29016 333 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 SOX6P35712 828 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 VHLP40337 213 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 ZNF134P52741 427 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 SNRPGP62308 76 aaKnown RBP10.95□□□□□ -0.66
SLIRP-210ENST00000557431 PAX5Q02548 391 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 SLC25A30Q5SVS4 291 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 DDI2Q5TDH0 399 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 ZFAND6Q6FIF0 208 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 ZNF529Q6P280 563 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 LINC00311Q8N616 119 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 ZNF439Q8NDP4 499 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 OR4K15Q8NH41 348 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 OR52N1Q8NH53 320 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 OR1L1Q8NH94 360 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 DCUN1D4Q92564 292 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 ERVK13-1Q9NX77 482 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 ZNF107Q9UII5 783 aaPredicted RBP10.95□□□□□ -0.66
SLIRP-210ENST00000557431 SMAD5-AS1Q9Y6J3 95 aa10.95□□□□□ -0.66
SLIRP-210ENST00000557431 C12orf77C9JDV5 145 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 AIPO00170 330 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 ATP6V0E1O15342 81 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 MAGEB3O15480 346 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 GABRB1P18505 474 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 KCNJ3P48549 501 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 SLURP1P55000 103 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 KIAA0141Q14154 515 aaPredicted RBP10.94□□□□□ -0.66
SLIRP-210ENST00000557431 CT45A1Q5HYN5 189 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 ASCL4Q6XD76 172 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 SLC16A12Q6ZSM3 486 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 HAPLN4Q86UW8 402 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 ZNF491Q8N8L2 437 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 Q8NFD4 153 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 OR52I1Q8NGK6 324 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 OR1N2Q8NGR9 330 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 CT45A3Q8NHU0 189 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 GON7Q9BXV9 100 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 PARP11Q9NR21 331 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 GMPPBQ9Y5P6 360 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 LYSTQ99698 3801 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 STARD9Q9P2P6 4700 aa10.94□□□□□ -0.66
SLIRP-210ENST00000557431 TRIM64CA6NLI5 447 aa10.93□□□□□ -0.66
SLIRP-210ENST00000557431 I3L521 148 aa10.93□□□□□ -0.66
SLIRP-210ENST00000557431 MT-ND4P03905 459 aa10.93□□□□□ -0.66
SLIRP-210ENST00000557431 CSTBP04080 98 aaKnown RBP10.93□□□□□ -0.66
SLIRP-210ENST00000557431 SPNP16150 400 aa10.93□□□□□ -0.66
SLIRP-210ENST00000557431 GZMHP20718 246 aa10.93□□□□□ -0.66
SLIRP-210ENST00000557431 IL3RAP26951 378 aa10.93□□□□□ -0.66
SLIRP-210ENST00000557431 GBX2P52951 348 aaPredicted RBP10.93□□□□□ -0.66
SLIRP-210ENST00000557431 ADARB1P78563 741 aaKnown RBP10.93□□□□□ -0.66
SLIRP-210ENST00000557431 GNMTQ14749 295 aa10.93□□□□□ -0.66
SLIRP-210ENST00000557431 MMDQ15546 238 aa10.93□□□□□ -0.66
SLIRP-210ENST00000557431 SLC22A6Q4U2R8 563 aa10.93□□□□□ -0.66
SLIRP-210ENST00000557431 KLHL22Q53GT1 634 aa10.93□□□□□ -0.66
SLIRP-210ENST00000557431 SYT6Q5T7P8 510 aaPredicted RBP10.93□□□□□ -0.66
SLIRP-210ENST00000557431 MEDAGQ5VYS4 303 aa10.93□□□□□ -0.66
SLIRP-210ENST00000557431 SLC25A48Q6ZT89 311 aaKnown RBP10.93□□□□□ -0.66
SLIRP-210ENST00000557431 SYS1Q8N2H4 156 aa10.93□□□□□ -0.66
SLIRP-210ENST00000557431 OR52M1Q8NGK5 317 aa10.93□□□□□ -0.66
SLIRP-210ENST00000557431 MYOZ3Q8TDC0 251 aa10.93□□□□□ -0.66
SLIRP-210ENST00000557431 METTL9Q9H1A3 318 aa10.93□□□□□ -0.66
SLIRP-210ENST00000557431 GNG12Q9UBI6 72 aa10.93□□□□□ -0.66
SLIRP-210ENST00000557431 EPPK1P58107 5090 aaKnown RBP10.93□□□□□ -0.66
SLIRP-210ENST00000557431 DNAH1Q9P2D7 4330 aa10.92□□□□□ -0.66
SLIRP-210ENST00000557431 LOC100130705A0A1B0GUX0 176 aa10.92□□□□□ -0.66
SLIRP-210ENST00000557431 SAP30O75446 220 aa10.92□□□□□ -0.66
SLIRP-210ENST00000557431 HBZP02008 142 aa10.92□□□□□ -0.66
SLIRP-210ENST00000557431 FRMD6-AS1P0C7T7 363 aa10.92□□□□□ -0.66
SLIRP-210ENST00000557431 PPIFP30405 207 aaKnown RBP10.92□□□□□ -0.66
SLIRP-210ENST00000557431 ZNF93P35789 620 aaPredicted RBP10.92□□□□□ -0.66
SLIRP-210ENST00000557431 ZNF616Q08AN1 781 aa10.92□□□□□ -0.66
SLIRP-210ENST00000557431 LSAMPQ13449 338 aa10.92□□□□□ -0.66
SLIRP-210ENST00000557431 SRSF7Q16629 238 aaKnown RBP eCLIP10.92□□□□□ -0.66
SLIRP-210ENST00000557431 ZNF497Q6ZNH5 498 aa10.92□□□□□ -0.66
SLIRP-210ENST00000557431 TMEM106AQ96A25 262 aa10.92□□□□□ -0.66
SLIRP-210ENST00000557431 MRPL20Q9BYC9 149 aaKnown RBP10.92□□□□□ -0.66
SLIRP-210ENST00000557431 FBXO7Q9Y3I1 522 aa10.92□□□□□ -0.66
SLIRP-210ENST00000557431 SIRT4Q9Y6E7 314 aaPredicted RBP10.92□□□□□ -0.66
SLIRP-210ENST00000557431 ANKRD65E5RJM6 399 aa10.91□□□□□ -0.66
SLIRP-210ENST00000557431 OVOL1O14753 267 aa10.91□□□□□ -0.66
SLIRP-210ENST00000557431 ORC5O43913 435 aa10.91□□□□□ -0.66
SLIRP-210ENST00000557431 IGF1P05019 195 aa10.91□□□□□ -0.66
SLIRP-210ENST00000557431 OR8U8P0C7N1 319 aa10.91□□□□□ -0.66
SLIRP-210ENST00000557431 SNRPBP14678 240 aaKnown RBP10.91□□□□□ -0.66
SLIRP-210ENST00000557431 RCC1P18754 421 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-210ENST00000557431 BLVRBP30043 206 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-210ENST00000557431 NDPQ00604 133 aa10.91□□□□□ -0.66
SLIRP-210ENST00000557431 GABPB1Q06547 395 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms