RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 SDCBPO00560 298 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-228ENST00000557302 NAPSAO96009 420 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 IGLV1-47P01700 117 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 SNRPBP14678 240 aaKnown RBP11.01□□□□□ -0.65
SHMT2-228ENST00000557302 RCC1P18754 421 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-228ENST00000557302 PAX6P26367 422 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 HTR1DP28221 377 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 TGFBR1P36897 503 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 SSX2Q16385 188 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 AANATQ16613 207 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 LRRC75BQ2VPJ9 315 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 TMEM30BQ3MIR4 351 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 LDLRAD2Q5SZI1 272 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 IDNKQ5T6J7 187 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 C16orf87Q6PH81 154 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 MOB1BQ7L9L4 216 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 ZNF554Q86TJ5 538 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 CROCCP3Q8IVE0 287 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 OR52M1Q8NGK5 317 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 OR10R2Q8NGX6 335 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 OR5R1Q8NH85 324 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 OR9G1Q8NH87 305 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 LGALS14Q8TCE9 139 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 CREB3L1Q96BA8 519 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 RAB3CQ96E17 227 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 SSX3Q99909 188 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 PECRQ9BY49 303 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 CHIAQ9BZP6 476 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 RIMS4Q9H426 269 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-228ENST00000557302 TAF9BQ9HBM6 251 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 MBNL3Q9NUK0 354 aaKnown RBP11.01□□□□□ -0.65
SHMT2-228ENST00000557302 AK3Q9UIJ7 227 aa11.01□□□□□ -0.65
SHMT2-228ENST00000557302 H3BUX3 64 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 TMEM127O75204 238 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 IGHV3-7P01780 117 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 HBZP02008 142 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 SCAND1P57086 179 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 HLA-DRB5Q30154 266 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 MOGAT2Q3SYC2 334 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 PLAC9Q5JTB6 97 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 UTF1Q5T230 341 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 GPR141Q7Z602 305 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 DYNAPQ8N1N2 210 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 PRR18Q8N4B5 295 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 OR1L1Q8NH94 360 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 LEAP2Q969E1 77 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 ATG5Q9H1Y0 275 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 MMP28Q9H239 520 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 C12orf4Q9NQ89 552 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 GFOD1Q9NXC2 390 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 DPM3Q9P2X0 92 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 VPREB3Q9UKI3 123 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 PSG11Q9UQ72 335 aa11□□□□□ -0.65
SHMT2-228ENST00000557302 AMMECR1Q9Y4X0 333 aaPredicted RBP11□□□□□ -0.65
SHMT2-228ENST00000557302 IGHV3-43A0A0B4J1X8 118 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 FAM181BA6NEQ2 426 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 VGLL3A8MV65 326 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 LEUTXA8MZ59 168 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 J3QR06 171 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 RAB27BO00194 218 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 SCGNO76038 276 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 IGHV3-43DP0DP04 118 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 RPS19P39019 145 aaKnown RBP10.99□□□□□ -0.65
SHMT2-228ENST00000557302 CEACAM3P40198 252 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 ALDH3B2P48448 385 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 SERPINB10P48595 397 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 GNG10P50151 68 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 LOXL3P58215 753 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 MRPS15P82914 257 aaKnown RBP10.99□□□□□ -0.65
SHMT2-228ENST00000557302 PLA1AQ53H76 456 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 ANKRD13BQ86YJ7 626 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 SETD6Q8TBK2 473 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 GCDHQ92947 438 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-228ENST00000557302 CMSS1Q9BQ75 279 aaKnown RBP10.99□□□□□ -0.65
SHMT2-228ENST00000557302 HDHD3Q9BSH5 251 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-228ENST00000557302 ABCB10Q9NRK6 738 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 ABRACLQ9P1F3 81 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 GNG12Q9UBI6 72 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 HILPDAQ9Y5L2 63 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 ETV7Q9Y603 341 aa10.99□□□□□ -0.65
SHMT2-228ENST00000557302 A0A075B6Q4 140 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 TRBV6-6A0A0A6YYG2 114 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 POM121CA8CG34 1229 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 BUB1B-PAK6H3BSN5 160 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 GPR137BO60478 399 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 GABARAPO95166 117 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 TFAP2AP05549 437 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 CRYBA1P05813 215 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 CD3GP09693 182 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 HIST1H1DP16402 221 aaKnown RBP10.98□□□□□ -0.65
SHMT2-228ENST00000557302 GNB3P16520 340 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 ARHGDIBP52566 201 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 VBP1P61758 197 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 NCS1P62166 190 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 ARL6IP1Q15041 203 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 HMGN3Q15651 99 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 Q3ZCU0 254 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 ZNF880Q6PDB4 577 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 OR10X1Q8NGY0 326 aa10.98□□□□□ -0.65
SHMT2-228ENST00000557302 OR2S2Q9NQN1 319 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms