RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 TMEM59Q9BXS4 323 aa18.12■□□□□ 0.49
PABPN1-207ENST00000556821 AK6Q9Y3D8 172 aaKnown RBP18.12■□□□□ 0.49
PABPN1-207ENST00000556821 AMMECR1Q9Y4X0 333 aaPredicted RBP18.12■□□□□ 0.49
PABPN1-207ENST00000556821 A0A1W2PPI3 338 aa18.11■□□□□ 0.49
PABPN1-207ENST00000556821 SDCBPO00560 298 aaPredicted RBP18.11■□□□□ 0.49
PABPN1-207ENST00000556821 SLC17A2O00624 439 aa18.11■□□□□ 0.49
PABPN1-207ENST00000556821 CA11O75493 328 aa18.11■□□□□ 0.49
PABPN1-207ENST00000556821 ARL6IP5O75915 188 aa18.11■□□□□ 0.49
PABPN1-207ENST00000556821 RCC1P18754 421 aaPredicted RBP18.11■□□□□ 0.49
PABPN1-207ENST00000556821 BLCAPP62952 87 aa18.11■□□□□ 0.49
PABPN1-207ENST00000556821 C11orf88Q6PI97 169 aa18.11■□□□□ 0.49
PABPN1-207ENST00000556821 KLHDC1Q8N7A1 406 aa18.11■□□□□ 0.49
PABPN1-207ENST00000556821 TOMM40LQ969M1 308 aa18.11■□□□□ 0.49
PABPN1-207ENST00000556821 RPEQ96AT9 228 aa18.11■□□□□ 0.49
PABPN1-207ENST00000556821 TM2D1Q9BX74 207 aa18.11■□□□□ 0.49
PABPN1-207ENST00000556821 GFOD1Q9NXC2 390 aa18.11■□□□□ 0.49
PABPN1-207ENST00000556821 TRAPPC2LQ9UL33 140 aa18.11■□□□□ 0.49
PABPN1-207ENST00000556821 IGHV3-43A0A0B4J1X8 118 aa18.1■□□□□ 0.49
PABPN1-207ENST00000556821 TIMM23O14925 209 aa18.1■□□□□ 0.49
PABPN1-207ENST00000556821 BPNT1O95861 308 aa18.1■□□□□ 0.49
PABPN1-207ENST00000556821 IGHV3-43DP0DP04 118 aa18.1■□□□□ 0.49
PABPN1-207ENST00000556821 CALRP27797 417 aaKnown RBP18.1■□□□□ 0.49
PABPN1-207ENST00000556821 ARHGDIBP52566 201 aa18.1■□□□□ 0.49
PABPN1-207ENST00000556821 MADCAM1Q13477 382 aa18.1■□□□□ 0.49
PABPN1-207ENST00000556821 NKAPLQ5M9Q1 402 aa18.1■□□□□ 0.49
PABPN1-207ENST00000556821 CCDC144NLQ6NUI1 221 aa18.1■□□□□ 0.49
PABPN1-207ENST00000556821 KCNG3Q8TAE7 436 aa18.1■□□□□ 0.49
PABPN1-207ENST00000556821 MRPL30Q8TCC3 161 aaKnown RBP18.1■□□□□ 0.49
PABPN1-207ENST00000556821 CFHR4Q92496 578 aa18.1■□□□□ 0.49
PABPN1-207ENST00000556821 SULT4A1Q9BR01 284 aa18.1■□□□□ 0.49
PABPN1-207ENST00000556821 LIN7BQ9HAP6 207 aa18.1■□□□□ 0.49
PABPN1-207ENST00000556821 MBNL3Q9NUK0 354 aaKnown RBP18.1■□□□□ 0.49
PABPN1-207ENST00000556821 NDUFB11Q9NX14 153 aa18.1■□□□□ 0.49
PABPN1-207ENST00000556821 A0A0A6YYD4 124 aa18.09■□□□□ 0.49
PABPN1-207ENST00000556821 PLXNB1O43157 2135 aa18.09■□□□□ 0.49
PABPN1-207ENST00000556821 MRPS14O60783 128 aaKnown RBP18.09■□□□□ 0.49
PABPN1-207ENST00000556821 P2RY14Q15391 338 aa18.09■□□□□ 0.49
PABPN1-207ENST00000556821 C16orf82Q7Z2V1 217 aa18.09■□□□□ 0.49
PABPN1-207ENST00000556821 OR1L1Q8NH94 360 aa18.09■□□□□ 0.49
PABPN1-207ENST00000556821 SLC25A33Q9BSK2 321 aa18.09■□□□□ 0.49
PABPN1-207ENST00000556821 PRSS22Q9GZN4 317 aa18.09■□□□□ 0.49
PABPN1-207ENST00000556821 Q9H521 79 aa18.09■□□□□ 0.49
PABPN1-207ENST00000556821 NBEAL2Q6ZNJ1 2754 aa18.08■□□□□ 0.49
PABPN1-207ENST00000556821 RYR3Q15413 4870 aa18.08■□□□□ 0.49
PABPN1-207ENST00000556821 SHISA3A0PJX4 238 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 FAM90A9PA6NNJ1 464 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 M0QZ24 198 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 HBZP02008 142 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 MNDAP41218 407 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 HERPUD1Q15011 391 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 TMEM95Q3KNT9 176 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 C6orf183Q5T699 404 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 CD200R1LQ6Q8B3 271 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 C6orf201Q7Z4U5 140 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 C5orf24Q7Z6I8 188 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 SPARTQ8N0X7 666 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 LINC00311Q8N616 119 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 C8orf31Q8N9H6 132 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 ZNF439Q8NDP4 499 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 OR56B4Q8NH76 319 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 WIPF2Q8TF74 440 aaPredicted RBP18.08■□□□□ 0.48
PABPN1-207ENST00000556821 LPAR5Q9H1C0 372 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 PLGRKTQ9HBL7 147 aa18.08■□□□□ 0.48
PABPN1-207ENST00000556821 RRP15Q9Y3B9 282 aaKnown RBP18.08■□□□□ 0.48
PABPN1-207ENST00000556821 H3BUI4 141 aa18.07■□□□□ 0.48
PABPN1-207ENST00000556821 SLC31A2O15432 143 aa18.07■□□□□ 0.48
PABPN1-207ENST00000556821 OR2F2O95006 317 aa18.07■□□□□ 0.48
PABPN1-207ENST00000556821 TSPAN15O95858 294 aa18.07■□□□□ 0.48
PABPN1-207ENST00000556821 AMY1AP04745 511 aa18.07■□□□□ 0.48
PABPN1-207ENST00000556821 AMY2AP04746 511 aa18.07■□□□□ 0.48
PABPN1-207ENST00000556821 VSIG10L2P0DP72 767 aa18.07■□□□□ 0.48
PABPN1-207ENST00000556821 UBE2UQ5VVX9 321 aa18.07■□□□□ 0.48
PABPN1-207ENST00000556821 TRAT1Q6PIZ9 186 aa18.07■□□□□ 0.48
PABPN1-207ENST00000556821 Q6ZPA2 131 aa18.07■□□□□ 0.48
PABPN1-207ENST00000556821 OR2W3Q7Z3T1 314 aa18.07■□□□□ 0.48
PABPN1-207ENST00000556821 SVOPQ8N4V2 548 aa18.07■□□□□ 0.48
PABPN1-207ENST00000556821 DRAM1Q8N682 238 aa18.07■□□□□ 0.48
PABPN1-207ENST00000556821 DTX3Q8N9I9 347 aa18.07■□□□□ 0.48
PABPN1-207ENST00000556821 OR10X1Q8NGY0 326 aa18.07■□□□□ 0.48
PABPN1-207ENST00000556821 RBM14Q96PK6 669 aaKnown RBP18.07■□□□□ 0.48
PABPN1-207ENST00000556821 HSD17B6O14756 317 aa18.06■□□□□ 0.48
PABPN1-207ENST00000556821 SPINT2O43291 252 aa18.06■□□□□ 0.48
PABPN1-207ENST00000556821 RAB7AP51149 207 aa18.06■□□□□ 0.48
PABPN1-207ENST00000556821 CLDN12P56749 244 aa18.06■□□□□ 0.48
PABPN1-207ENST00000556821 Q3ZCU0 254 aa18.06■□□□□ 0.48
PABPN1-207ENST00000556821 PRR18Q8N4B5 295 aa18.06■□□□□ 0.48
PABPN1-207ENST00000556821 C11orf44Q8N8P7 122 aa18.06■□□□□ 0.48
PABPN1-207ENST00000556821 NEDD4LQ96PU5 975 aa18.06■□□□□ 0.48
PABPN1-207ENST00000556821 OCSTAMPQ9BR26 566 aa18.06■□□□□ 0.48
PABPN1-207ENST00000556821 FAAP24Q9BTP7 215 aa18.06■□□□□ 0.48
PABPN1-207ENST00000556821 WNT10AQ9GZT5 417 aa18.06■□□□□ 0.48
PABPN1-207ENST00000556821 TAF9BQ9HBM6 251 aa18.06■□□□□ 0.48
PABPN1-207ENST00000556821 TRDV1A0A1B0GX56 115 aa18.05■□□□□ 0.48
PABPN1-207ENST00000556821 FOXI3A8MTJ6 420 aaPredicted RBP18.05■□□□□ 0.48
PABPN1-207ENST00000556821 SNRNP70P08621 437 aaKnown RBP18.05■□□□□ 0.48
PABPN1-207ENST00000556821 ARSBP15848 533 aa18.05■□□□□ 0.48
PABPN1-207ENST00000556821 ZNF816Q0VGE8 651 aaPredicted RBP18.05■□□□□ 0.48
PABPN1-207ENST00000556821 RAB11BQ15907 218 aa18.05■□□□□ 0.48
PABPN1-207ENST00000556821 TMEM30BQ3MIR4 351 aa18.05■□□□□ 0.48
PABPN1-207ENST00000556821 Q6ZTK2 550 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms