RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 OR4P4Q8NGL7 312 aa7.81□□□□□ -1.16
SRP54-210ENST00000556380 SPATA3Q8NHX4 192 aa7.81□□□□□ -1.16
SRP54-210ENST00000556380 RFESDQ8TAC1 157 aa7.81□□□□□ -1.16
SRP54-210ENST00000556380 MRPL30Q8TCC3 161 aaKnown RBP7.81□□□□□ -1.16
SRP54-210ENST00000556380 KCTD7Q96MP8 289 aa7.81□□□□□ -1.16
SRP54-210ENST00000556380 FAAP24Q9BTP7 215 aa7.81□□□□□ -1.16
SRP54-210ENST00000556380 CLEC7AQ9BXN2 247 aa7.81□□□□□ -1.16
SRP54-210ENST00000556380 CHIAQ9BZP6 476 aa7.81□□□□□ -1.16
SRP54-210ENST00000556380 ZNF286AQ9HBT8 521 aa7.81□□□□□ -1.16
SRP54-210ENST00000556380 MBNL3Q9NUK0 354 aaKnown RBP7.81□□□□□ -1.16
SRP54-210ENST00000556380 IDI2-AS1Q9NZ38 188 aa7.81□□□□□ -1.16
SRP54-210ENST00000556380 RAB22AQ9UL26 194 aa7.81□□□□□ -1.16
SRP54-210ENST00000556380 TBL2Q9Y4P3 447 aaKnown RBP7.81□□□□□ -1.16
SRP54-210ENST00000556380 LOC100506127A0A0U1RQW1 187 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 UBE2QL1A1L167 161 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 TMEM89A2RUT3 159 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 SMIM30A4D0T7 59 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 VGLL3A8MV65 326 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 C12orf77C9JDV5 145 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 LY6LH3BQJ8 138 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 F2RL2O00254 374 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 TMEM127O75204 238 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 NAPSAO96009 420 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 ARG1P05089 322 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 SLC2A2P11168 524 aaPredicted RBP7.8□□□□□ -1.16
SRP54-210ENST00000556380 RCC1P18754 421 aaPredicted RBP7.8□□□□□ -1.16
SRP54-210ENST00000556380 RAB6AP20340 208 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 BLVRBP30043 206 aaPredicted RBP7.8□□□□□ -1.16
SRP54-210ENST00000556380 LOXL3P58215 753 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 PLAC9Q5JTB6 97 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 MINOS1Q5TGZ0 78 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 ZNF880Q6PDB4 577 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 SLC16A12Q6ZSM3 486 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 OR52M1Q8NGK5 317 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 OR13F1Q8NGS4 319 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 NEK7Q8TDX7 302 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 CCDC107Q8WV48 283 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 PTX4Q96A99 478 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 MALSU1Q96EH3 234 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 NEDD4LQ96PU5 975 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 URM1Q9BTM9 101 aaKnown RBP7.8□□□□□ -1.16
SRP54-210ENST00000556380 LIN7BQ9HAP6 207 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 HSF4Q9ULV5 492 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 MINOS1-NBL1R4GNA1 71 aa7.8□□□□□ -1.16
SRP54-210ENST00000556380 TRBV6-6A0A0A6YYG2 114 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 A6NHS1 94 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 RAB27BO00194 218 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 AIREO43918 545 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 PAHP00439 452 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 TFAP2AP05549 437 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 HKR1P10072 659 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 ALDH3B2P48448 385 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 COMPP49747 757 aaPredicted RBP7.79□□□□□ -1.16
SRP54-210ENST00000556380 VEGFCP49767 419 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 LGALS4P56470 323 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 DYNC1I2Q13409 638 aaKnown RBP7.79□□□□□ -1.16
SRP54-210ENST00000556380 FAM189A2Q15884 450 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 MOGAT2Q3SYC2 334 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 FAM53AQ6NSI3 398 aaPredicted RBP7.79□□□□□ -1.16
SRP54-210ENST00000556380 SFXN4Q6P4A7 337 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 C5orf24Q7Z6I8 188 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 ZNF554Q86TJ5 538 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 OR4K15Q8NH41 348 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 ZNF596Q8TC21 504 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 TAF15Q92804 592 aaKnown RBP eCLIP7.79□□□□□ -1.16
SRP54-210ENST00000556380 ARL11Q969Q4 196 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 ARHGAP5-AS1Q96IT6 56 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 DPAGT1Q9H3H5 408 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 GFOD1Q9NXC2 390 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 DPM3Q9P2X0 92 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 PSG11Q9UQ72 335 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 KCNK7Q9Y2U2 307 aa7.79□□□□□ -1.16
SRP54-210ENST00000556380 FAM172BPA6NC97 362 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 BUB1B-PAK6H3BSN5 160 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 J3QR06 171 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 HBZP02008 142 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 NFYBP25208 207 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 HTR1DP28221 377 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 TGFBR1P36897 503 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 DYNLT3P51808 116 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 SSX2Q16385 188 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 LRRC75BQ2VPJ9 315 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 HLA-DRB5Q30154 266 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 C6orf183Q5T699 404 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 Q6ZTK2 550 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 C8orf31Q8N9H6 132 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 OR56B1Q8NGI3 324 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 OR5R1Q8NH85 324 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 OR9G1Q8NH87 305 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 OR1L1Q8NH94 360 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 UBALD1Q8TB05 177 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 LEAP2Q969E1 77 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 SSX3Q99909 188 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 FUNDC2Q9BWH2 189 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 PECRQ9BY49 303 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 TNFRSF19Q9NS68 423 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 PLEKHJ1Q9NW61 149 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 C1RLQ9NZP8 487 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 AK3Q9UIJ7 227 aa7.78□□□□□ -1.16
SRP54-210ENST00000556380 VPREB3Q9UKI3 123 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms