RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 HCCSP53701 268 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 H2BFSP57053 126 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 TMEM33P57088 247 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 HILS1P60008 231 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 FLI1Q01543 452 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-240ENST00000556339 POU3F1Q03052 451 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-240ENST00000556339 MADCAM1Q13477 382 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 ZNF273Q14593 569 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 SURF2Q15527 256 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-240ENST00000556339 EFNB3Q15768 340 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 SGCAQ16586 387 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 MEP1BQ16820 701 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 TBC1D28Q2M2D7 210 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 MS4A18Q3C1V0 323 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 KRTAP24-1Q3LI83 254 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 SMUG1Q53HV7 270 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 PAN3Q58A45 887 aaKnown RBP3.31□□□□□ -1.88
ATXN3-240ENST00000556339 MESTQ5EB52 335 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 WDR38Q5JTN6 314 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 ZNF660Q6AZW8 331 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-240ENST00000556339 C11orf88Q6PI97 169 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 DRAM2Q6UX65 266 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 UTS2BQ765I0 119 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 SLC35D2Q76EJ3 337 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 DPY19L4Q7Z388 723 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 OR2W3Q7Z3T1 314 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 ZNF546Q86UE3 836 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 CATSPERDQ86XM0 798 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 SERPINA12Q8IW75 414 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 IQCF2Q8IXL9 164 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 C20orf196Q8IYI0 205 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 MUC20Q8N307 709 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-240ENST00000556339 PRSS35Q8N3Z0 413 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 ARRDC1Q8N5I2 433 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 RFLNBQ8N5W9 214 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 OR51D1Q8NGF3 324 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 OR51L1Q8NGJ5 315 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 OR6N2Q8NGY6 317 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 ZNF418Q8TF45 676 aaPredicted RBP3.31□□□□□ -1.88
ATXN3-240ENST00000556339 MITD1Q8WV92 249 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 TSEN15Q8WW01 171 aaKnown RBP3.31□□□□□ -1.88
ATXN3-240ENST00000556339 AQP3Q92482 292 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 RDH5Q92781 318 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 FAM46BQ96A09 425 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 C10orf35Q96D05 121 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 RASD2Q96D21 266 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 SEH1LQ96EE3 360 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 TIMD4Q96H15 378 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 TSPAN32Q96QS1 320 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 PHB2Q99623 299 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 NMES1Q9C002 83 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 ZNF442Q9H7R0 627 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 TMEM138Q9NPI0 162 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 C12orf4Q9NQ89 552 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 ZFP57Q9NU63 452 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 MED29Q9NX70 200 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 TAAR3PQ9P1P4 343 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 TNFSF18Q9UNG2 199 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 FLVCR2Q9UPI3 526 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 POMT1Q9Y6A1 747 aa3.31□□□□□ -1.88
ATXN3-240ENST00000556339 ANK3Q12955 4377 aaKnown RBP3.31□□□□□ -1.88
ATXN3-240ENST00000556339 TRAV8-7A0A075B6U6 113 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 FXYD6-FXYD2A0A087WZ82 144 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 A0A096LNT2 108 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 LOC102725191A0A1B0GVB3 256 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 TVP23AA6NH52 213 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 F8VVB4 439 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 F8VWA3 439 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 TRIM77I1YAP6 450 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 GOSR2O14653 212 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 ARPC5O15511 151 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 FGF16O43320 207 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 DHHO43323 396 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 SRSF10O75494 262 aaKnown RBP3.3□□□□□ -1.88
ATXN3-240ENST00000556339 DUS4LO95620 317 aaKnown RBP3.3□□□□□ -1.88
ATXN3-240ENST00000556339 IGKV3-15P01624 115 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 IGLV1-44P01699 117 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 APOC1P02654 83 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 MAS1P04201 325 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 CD3DP04234 171 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 SERPINA5P05154 406 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 FCER2P06734 321 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 QDPRP09417 244 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 ZNF735P0CB33 412 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 LYL1P12980 280 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 ZNF35P13682 527 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 TPT1P13693 172 aaKnown RBP3.3□□□□□ -1.88
ATXN3-240ENST00000556339 B4GALT1P15291 398 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 ZBTB25P24278 435 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 CD34P28906 385 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 GCH1P30793 250 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 GLRXP35754 106 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 KIR3DL2P43630 455 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 PRKXP51817 358 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 DVL1P1P54792 670 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-240ENST00000556339 CLDN12P56749 244 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 KLF3P57682 345 aaPredicted RBP3.3□□□□□ -1.88
ATXN3-240ENST00000556339 CCL8P80075 99 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 HMGN3Q15651 99 aa3.3□□□□□ -1.88
ATXN3-240ENST00000556339 ZNF718Q3SXZ3 478 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms