RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 H3BSH0 61 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 SLC33A1O00400 549 aaPredicted RBP6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 DEGS1O15121 323 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 FKBP6O75344 327 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 CHATP28329 748 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 HTR1FP30939 366 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 PTGFRP43088 359 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 RAB7AP51149 207 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 SLC35B1P78383 322 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 PAX5Q02548 391 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 TMED1Q13445 227 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 DIAPH2-AS1Q14236 149 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 PNLIPRP3Q17RR3 467 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 KRBOX4Q5JUW0 171 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 CASC10Q5T4H9 136 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 TMEM244Q5VVB8 128 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 KDM4DQ6B0I6 523 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 TEX38Q6PEX7 206 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 GID4Q8IVV7 300 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 OR8H3Q8N146 312 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 STPG2Q8N412 459 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 Q8N6K4 173 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 Q8NFD4 153 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 HAVCR2Q8TDQ0 301 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 RPEQ96AT9 228 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 FYTTD1Q96QD9 318 aaKnown RBP6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 IL4I1Q96RQ9 567 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 OSBPL10Q9BXB5 764 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 PLSCR3Q9NRY6 295 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 OR6C3Q9NZP0 311 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 LINC00527Q9UJ94 153 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 PSG11Q9UQ72 335 aa6.98□□□□□ -1.29
GTF2A1-204ENST00000556268 LOC107986453A0A1B0GWG9 222 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 J3QRE1 110 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 M0R129 80 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 MITFO75030 526 aaPredicted RBP6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 FAM107AO95990 144 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 UBCP0CG48 685 aaKnown RBP6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 POU3F4P49335 361 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 ZNF85Q03923 595 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 HNF4GQ14541 408 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 C9orf66Q5T8R8 295 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 ELP2Q6IA86 826 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 SLC35E3Q7Z769 313 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 TGIF2LXQ8IUE1 241 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 KLHL30-AS1Q8NEE0 82 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 OR10A7Q8NGE5 316 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 OR2G2Q8NGZ5 317 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 OR56B4Q8NH76 319 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 CCDC124Q96CT7 223 aaKnown RBP6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 OPALINQ96PE5 141 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 DUX3Q96PT4 197 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 THTPAQ9BU02 230 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 PRRG3Q9BZD7 231 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 ABCG5Q9H222 651 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 PPIL3Q9H2H8 161 aaKnown RBP6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 IDI2-AS1Q9NZ38 188 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 SORL1Q92673 2214 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 RYR2Q92736 4967 aa6.97□□□□□ -1.29
GTF2A1-204ENST00000556268 TRAV24A0A0B4J272 114 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 CCRL2O00421 344 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 TMEM11P17152 192 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 NFYBP25208 207 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 C21orf33P30042 268 aaPredicted RBP6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 CCR9P51686 369 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 LUMP51884 338 aaPredicted RBP6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 SNU13P55769 128 aaKnown RBP6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 ZP1P60852 638 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 GNGT1P63211 74 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 CFHR3Q02985 330 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 SCN1BQ07699 218 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 ZNF816Q0VGE8 651 aaPredicted RBP6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 MADCAM1Q13477 382 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 FHL3Q13643 280 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 KIAA0141Q14154 515 aaPredicted RBP6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 RBM39Q14498 530 aaKnown RBP6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 FOXRED2Q8IWF2 684 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 OR10H4Q8NGA5 316 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 OR5M8Q8NGP6 311 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 MUC7Q8TAX7 377 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 TOMM40LQ969M1 308 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 TBX5Q99593 518 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 ASCL2Q99929 193 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 GON7Q9BXV9 100 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 KRTAP9-8Q9BYQ0 159 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 BARHL1Q9BZE3 327 aa6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 AMMECR1Q9Y4X0 333 aaPredicted RBP6.96□□□□□ -1.3
GTF2A1-204ENST00000556268 OR4C45A6NMZ5 311 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 IL1AP01583 271 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 IGKV1D-33P01593 117 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 IGKV1-33P01594 117 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 IGHG4P01861 327 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 GAPDHP04406 335 aaKnown RBP6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 DBTP11182 482 aaKnown RBP6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 ZNF44P15621 663 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 BTF3P20290 206 aaKnown RBP6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 POLR2IP36954 125 aaKnown RBP6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 GPR12P47775 334 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 GPR50Q13585 617 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 HES1Q14469 280 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms