RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 PHYHO14832 338 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 EEF1E1O43324 174 aaKnown RBP1.13□□□□□ -2.23
SCFD1-218ENST00000556256 TNFAIP8O95379 198 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 SNAP29O95721 258 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 CTSEP14091 401 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 ATF1P18846 271 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 SYT1P21579 422 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 FOXF1Q12946 379 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 XRCC4Q13426 336 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 SYCP1Q15431 976 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 SPIN4Q56A73 249 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 HENMT1Q5T8I9 393 aaKnown RBP1.13□□□□□ -2.23
SCFD1-218ENST00000556256 NIPAL1Q6NVV3 410 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 EBLN2Q6P2I7 272 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 TCF23Q7RTU1 214 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 MSRB3Q8IXL7 192 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 YIPF7Q8N8F6 280 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 OR8K1Q8NGG5 319 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 OR5D18Q8NGL1 313 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 OR2V1Q8NHB1 315 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 PHOSPHO2Q8TCD6 241 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 DYNC2LI1Q8TCX1 351 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 RNASEH2CQ8TDP1 164 aaKnown RBP1.13□□□□□ -2.23
SCFD1-218ENST00000556256 GTF2H4Q92759 462 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 UGT2B28Q9BY64 529 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 POTEKPQ9BYX7 375 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 C11orf49Q9H6J7 331 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 KCNIP2Q9NS61 270 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 CHMP5Q9NZZ3 219 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 HSPE1-MOB4S4R3N1 261 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 KMT2EQ8IZD2 1858 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 CRB1P82279 1406 aa1.13□□□□□ -2.23
SCFD1-218ENST00000556256 LTBP2Q14767 1821 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 NUP153P49790 1475 aaKnown RBP1.12□□□□□ -2.23
SCFD1-218ENST00000556256 SHANK3Q9BYB0 1731 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 LOC102725191A0A1B0GVB3 256 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 EFCAB9A8MZ26 197 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 H3BSA7 217 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 MPZL2O60487 215 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 SCN2BO60939 215 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 CBR1P16152 277 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 CRABP1P29762 137 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 STC1P52823 247 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 TMED1Q13445 227 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 PDGFRLQ15198 375 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 TIMM23BQ5SRD1 257 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 SELENOHQ8IZQ5 122 aaKnown RBP1.12□□□□□ -2.23
SCFD1-218ENST00000556256 C2orf73Q8N5S3 287 aaPredicted RBP1.12□□□□□ -2.23
SCFD1-218ENST00000556256 Q8NDZ9 215 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 OR4P4Q8NGL7 312 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 ZNRF2Q8NHG8 242 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 MFSD8Q8NHS3 518 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 GALMQ96C23 342 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 TMEM56Q96MV1 263 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 C1QTNF6Q9BXI9 259 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 CHST5Q9GZS9 411 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 ASCL3Q9NQ33 180 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 NRBP2Q9NSY0 501 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 DMAC2Q9NW81 257 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 MS4A12Q9NXJ0 267 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 COMMD9Q9P000 198 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 VWDEQ8N2E2 1590 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 CLUHO75153 1309 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 MAP3K19Q56UN5 1328 aa1.12□□□□□ -2.23
SCFD1-218ENST00000556256 F5H5K5 113 aa1.11□□□□□ -2.23
SCFD1-218ENST00000556256 KLRC4-KLRK1H3BQV0 150 aa1.11□□□□□ -2.23
SCFD1-218ENST00000556256 NEMFO60524 1076 aa1.11□□□□□ -2.23
SCFD1-218ENST00000556256 IGHV3-30-3P0DP02 117 aa1.11□□□□□ -2.23
SCFD1-218ENST00000556256 KDELR2P33947 212 aa1.11□□□□□ -2.23
SCFD1-218ENST00000556256 PSMD8P48556 350 aa1.11□□□□□ -2.23
SCFD1-218ENST00000556256 RAB8AP61006 207 aa1.11□□□□□ -2.23
SCFD1-218ENST00000556256 GTF2BQ00403 316 aa1.11□□□□□ -2.23
SCFD1-218ENST00000556256 CENPWQ5EE01 88 aa1.11□□□□□ -2.23
SCFD1-218ENST00000556256 CLEC6AQ6EIG7 209 aa1.11□□□□□ -2.23
SCFD1-218ENST00000556256 ZNF322Q6U7Q0 402 aaPredicted RBP1.11□□□□□ -2.23
SCFD1-218ENST00000556256 ZNF567Q8N184 647 aa1.11□□□□□ -2.23
SCFD1-218ENST00000556256 AICDAQ9GZX7 198 aa1.11□□□□□ -2.23
SCFD1-218ENST00000556256 GTSF1LQ9H1H1 148 aa1.11□□□□□ -2.23
SCFD1-218ENST00000556256 FBXL3Q9UKT7 428 aa1.11□□□□□ -2.23
SCFD1-218ENST00000556256 SCML1Q9UN30 329 aa1.11□□□□□ -2.23
SCFD1-218ENST00000556256 CCL26Q9Y258 94 aa1.11□□□□□ -2.23
SCFD1-218ENST00000556256 YLPM1P49750 1951 aaKnown RBP1.1□□□□□ -2.23
SCFD1-218ENST00000556256 IGSF23A1L1A6 192 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 A8MWP6 167 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 ODF3BA8MYP8 253 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 C9J4A7 227 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 M0QX08 132 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 TP53I11O14683 189 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 NPPAP01160 153 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 FBP1P09467 338 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 CSRP1P21291 193 aaKnown RBP1.1□□□□□ -2.23
SCFD1-218ENST00000556256 GADD45AP24522 165 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 ACTR1BP42025 376 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 DLX6P56179 175 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 DYNLL1P63167 89 aaKnown RBP1.1□□□□□ -2.23
SCFD1-218ENST00000556256 BSPH1Q075Z2 132 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 TSPAN31Q12999 210 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 LRRC26Q2I0M4 334 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 FAM229BQ4G0N7 80 aa1.1□□□□□ -2.23
SCFD1-218ENST00000556256 XKRXQ6PP77 449 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms