RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 SMIM18P0DKX4 95 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 SLC2A2P11168 524 aaPredicted RBP8.62□□□□□ -1.03
TMEM260-206ENST00000555046 TALDO1P37837 337 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 RPS19P39019 145 aaKnown RBP8.62□□□□□ -1.03
TMEM260-206ENST00000555046 IER3P46695 156 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 ALDH3B2P48448 385 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 RPL15P61313 204 aaKnown RBP8.62□□□□□ -1.03
TMEM260-206ENST00000555046 LSM3P62310 102 aaKnown RBP8.62□□□□□ -1.03
TMEM260-206ENST00000555046 PITPNAQ00169 270 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 KLRD1Q13241 179 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 PRAMEF5Q5TYX0 476 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 HCP5Q6MZN7 132 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 CCDC144NLQ6NUI1 221 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 C16orf87Q6PH81 154 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 NR2C2APQ86WQ0 139 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 LDLRAD3Q86YD5 345 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 C8orf31Q8N9H6 132 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 OR4K15Q8NH41 348 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 RFESDQ8TAC1 157 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 NDNFQ8TB73 568 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 ACOT12Q8WYK0 555 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 AP3S1Q92572 193 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 SLC25A46Q96AG3 418 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 S100A16Q96FQ6 103 aaKnown RBP8.62□□□□□ -1.03
TMEM260-206ENST00000555046 KIRREL1Q96J84 757 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 CMSS1Q9BQ75 279 aaKnown RBP8.62□□□□□ -1.03
TMEM260-206ENST00000555046 BCL7BQ9BQE9 202 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 SULT4A1Q9BR01 284 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 NICN1Q9BSH3 213 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 PECRQ9BY49 303 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 C12orf4Q9NQ89 552 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 ABCB10Q9NRK6 738 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 MBNL3Q9NUK0 354 aaKnown RBP8.62□□□□□ -1.03
TMEM260-206ENST00000555046 ZNF581Q9P0T4 197 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 SPATA2Q9UM82 520 aa8.62□□□□□ -1.03
TMEM260-206ENST00000555046 MEX3AA1L020 520 aaKnown RBP8.61□□□□□ -1.03
TMEM260-206ENST00000555046 VGLL3A8MV65 326 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 RAB27BO00194 218 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 F2RL2O00254 374 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 SDCBPO00560 298 aaPredicted RBP8.61□□□□□ -1.03
TMEM260-206ENST00000555046 VENTXO95231 258 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 NAPSAO96009 420 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 TFAP2AP05549 437 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 LPLP06858 475 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 OMGP23515 440 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 IL3RAP26951 378 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 BRS3P32247 399 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 MNDAP41218 407 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 SERPINB10P48595 397 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 TMEM50BP56557 158 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 HTD2P86397 168 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 SLC9A3R2Q15599 337 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 GPR107Q5VW38 600 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 MZT2AQ6P582 158 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 RAB2BQ8WUD1 216 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 ARHGAP5-AS1Q96IT6 56 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 CMTM3Q96MX0 182 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 ZNF48Q96MX3 618 aaPredicted RBP8.61□□□□□ -1.03
TMEM260-206ENST00000555046 GHITMQ9H3K2 345 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 RNF167Q9H6Y7 350 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 TAF9BQ9HBM6 251 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 RAB18Q9NP72 206 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 OR2S2Q9NQN1 319 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 GNG12Q9UBI6 72 aa8.61□□□□□ -1.03
TMEM260-206ENST00000555046 SMIM31A0A1B0GVY4 71 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 FOXI3A8MTJ6 420 aaPredicted RBP8.6□□□□□ -1.03
TMEM260-206ENST00000555046 ODF3BA8MYP8 253 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 C12orf77C9JDV5 145 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 C15orf65H3BRN8 121 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 BUB1B-PAK6H3BSN5 160 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 J3QR06 171 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 HOXA3O43365 443 aaPredicted RBP8.6□□□□□ -1.03
TMEM260-206ENST00000555046 MMP23AO75900 390 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 GABARAPO95166 117 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 HBZP02008 142 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 RNASE1P07998 156 aaKnown RBP8.6□□□□□ -1.03
TMEM260-206ENST00000555046 MELTFP08582 738 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 CLEC2LP0C7M8 214 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 SNRPBP14678 240 aaKnown RBP8.6□□□□□ -1.03
TMEM260-206ENST00000555046 HIST1H1DP16402 221 aaKnown RBP8.6□□□□□ -1.03
TMEM260-206ENST00000555046 RCC1P18754 421 aaPredicted RBP8.6□□□□□ -1.03
TMEM260-206ENST00000555046 SSTR5P35346 364 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 SOX6P35712 828 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 KIR2DS4P43632 304 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 TMBIM6P55061 237 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 VBP1P61758 197 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 UBA52P62987 128 aaKnown RBP8.6□□□□□ -1.03
TMEM260-206ENST00000555046 MADCAM1Q13477 382 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 ARFRP1Q13795 201 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 KIR2DS1Q14954 304 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 SSX2Q16385 188 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 SRSF7Q16629 238 aaKnown RBP eCLIP8.6□□□□□ -1.03
TMEM260-206ENST00000555046 LRRC75BQ2VPJ9 315 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 CDNFQ49AH0 187 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 LY6G6FQ5SQ64 297 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 LIAT1Q6ZQX7 453 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 ZDHHC22Q8N966 263 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 OR10X1Q8NGY0 326 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 SETD6Q8TBK2 473 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 MRPL30Q8TCC3 161 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms