RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ARAP3Q8WWN8 1544 aa1.53□□□□□ -2.16
SCFD1-213ENST00000554776 OR5P3Q8WZ94 311 aa1.53□□□□□ -2.16
SCFD1-213ENST00000554776 CMBLQ96DG6 245 aa1.53□□□□□ -2.16
SCFD1-213ENST00000554776 CHST5Q9GZS9 411 aa1.53□□□□□ -2.16
SCFD1-213ENST00000554776 ABCG5Q9H222 651 aa1.53□□□□□ -2.16
SCFD1-213ENST00000554776 SDK2Q58EX2 2172 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 SHROOM3Q8TF72 1996 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 CRB1P82279 1406 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 IGKV3D-11A0A0A0MRZ8 115 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 LECT2O14960 151 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 CETN3O15182 167 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 TOX3O15405 576 aaPredicted RBP1.52□□□□□ -2.17
SCFD1-213ENST00000554776 COCHO43405 550 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 CYTH3O43739 400 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 LTAP01374 205 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 OR12D1P0DN82 309 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 ZNF22P17026 224 aaPredicted RBP1.52□□□□□ -2.17
SCFD1-213ENST00000554776 ORM2P19652 201 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 GADD45AP24522 165 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 CD40LGP29965 261 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 COILP38432 576 aaPredicted RBP1.52□□□□□ -2.17
SCFD1-213ENST00000554776 INPP1P49441 399 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 FAM3AP98173 230 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 BSPH1Q075Z2 132 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 SMAGPQ0VAQ4 97 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 C1DQ13901 141 aaKnown RBP1.52□□□□□ -2.17
SCFD1-213ENST00000554776 PAFAH1B3Q15102 231 aaKnown RBP1.52□□□□□ -2.17
SCFD1-213ENST00000554776 MMDQ15546 238 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 C4orf26Q17RF5 130 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 CLEC6AQ6EIG7 209 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 SCXQ7RTU7 201 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 VN1R4Q7Z5H5 301 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 HS3ST5Q8IZT8 346 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 YIPF7Q8N8F6 280 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 BPIFB6Q8NFQ5 453 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 DTD1Q8TEA8 209 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 HIST1H2BAQ96A08 127 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 PPWD1Q96BP3 646 aaKnown RBP1.52□□□□□ -2.17
SCFD1-213ENST00000554776 PYURFQ96I23 114 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 TM2D3Q9BRN9 247 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 DCUN1D5Q9BTE7 237 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 TMEM208Q9BTX3 173 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 RPUSD1Q9UJJ7 312 aaKnown RBP1.52□□□□□ -2.17
SCFD1-213ENST00000554776 LINC00588Q9Y4M8 146 aa1.52□□□□□ -2.17
SCFD1-213ENST00000554776 TRBV24-1A0A075B6N3 115 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 C1orf232A0A0U1RR37 186 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 DAPL1A0PJW8 107 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 GOLGA6L10A6NI86 522 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 METTL15A6NJ78 407 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 F5H5K5 113 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 PHYHO14832 338 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 ATP8B1O43520 1251 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 SYNGR1O43759 233 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 SYNGR2O43760 224 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 SH2D1AO60880 128 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 UGT2B11O75310 529 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 CBR3O75828 277 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 YEATS4O95619 227 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 ORM1P02763 201 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 FBP1P09467 338 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 F8A1P23610 371 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 ACTBP60709 375 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 ACTG1P63261 375 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 PDGFRLQ15198 375 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 TAF9Q16594 264 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 DNAL1Q4LDG9 190 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 TRMT12Q53H54 448 aaKnown RBP1.51□□□□□ -2.17
SCFD1-213ENST00000554776 C10orf91Q5T1B1 145 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 HENMT1Q5T8I9 393 aaKnown RBP1.51□□□□□ -2.17
SCFD1-213ENST00000554776 SPATA31B1PQ5VZV4 182 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 FAM45BPQ6NSW5 357 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 NOXRED1Q6NXP6 359 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 LYZL2Q7Z4W2 148 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 SPATA24Q86W54 205 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 SLC13A5Q86YT5 568 aaPredicted RBP1.51□□□□□ -2.17
SCFD1-213ENST00000554776 ZBTB8OSQ8IWT0 167 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 C3orf22Q8N5N4 141 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 TMEM75Q8N9X5 138 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 Q8NAQ8 132 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 LFNGQ8NES3 379 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 TAMM41Q96BW9 452 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 EBNA1BP2Q99848 306 aaKnown RBP1.51□□□□□ -2.17
SCFD1-213ENST00000554776 BCL2L14Q9BZR8 327 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 WDR54Q9H977 334 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 ZNF286AQ9HBT8 521 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 IMP3Q9NV31 184 aaKnown RBP1.51□□□□□ -2.17
SCFD1-213ENST00000554776 PUS1Q9Y606 427 aaKnown RBP eCLIP1.51□□□□□ -2.17
SCFD1-213ENST00000554776 NACADO15069 1562 aa1.51□□□□□ -2.17
SCFD1-213ENST00000554776 CHD2O14647 1828 aaKnown RBP1.5□□□□□ -2.17
SCFD1-213ENST00000554776 CLUHO75153 1309 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 TMEM213A2RRL7 107 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 SDHAF1A6NFY7 115 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 FTCDNL1E5RQL4 147 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 F5H5T6 163 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 KLRC4-KLRK1H3BQV0 150 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 M0QYV0 167 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 LIN7AO14910 233 aaPredicted RBP1.5□□□□□ -2.17
SCFD1-213ENST00000554776 SLC25A20O43772 301 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 ARL6IP5O75915 188 aa1.5□□□□□ -2.17
SCFD1-213ENST00000554776 TPM3P06753 285 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms