RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 F2RP25116 425 aa13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 HOXA1P49639 335 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 IDH3GP51553 393 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 HLA-DRB3P79483 266 aa13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 RNPS1Q15287 305 aaKnown RBP13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 ARHGAP21Q5T5U3 1957 aa13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 Q6ZS49 121 aa13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 C15orf54Q8N8G6 183 aa13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 SFT2D1Q8WV19 159 aa13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 GPR146Q96CH1 333 aa13.34□□□□□ -0.27
ARHGEF40-203ENST00000554514 PTAFRP25105 342 aa13.33□□□□□ -0.27
ARHGEF40-203ENST00000554514 HNF4GQ14541 408 aa13.33□□□□□ -0.27
ARHGEF40-203ENST00000554514 ALKBH6Q3KRA9 238 aa13.33□□□□□ -0.27
ARHGEF40-203ENST00000554514 SOHLH1Q5JUK2 328 aa13.33□□□□□ -0.27
ARHGEF40-203ENST00000554514 OR1K1Q8NGR3 316 aa13.33□□□□□ -0.27
ARHGEF40-203ENST00000554514 OR2J1Q9GZK6 312 aa13.33□□□□□ -0.27
ARHGEF40-203ENST00000554514 OR14J1Q9UGF5 321 aa13.33□□□□□ -0.27
ARHGEF40-203ENST00000554514 TRAPPC2LQ9UL33 140 aa13.33□□□□□ -0.27
ARHGEF40-203ENST00000554514 PRR14LQ5THK1 2151 aa13.33□□□□□ -0.27
ARHGEF40-203ENST00000554514 H0Y980 276 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 SS18L1O75177 396 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 S100A6P06703 90 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 CTXN2P0C2S0 81 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 S100GP29377 79 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 CEBPDP49716 269 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 SULT1A1P50225 295 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 OR2B8PP59922 312 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 ID3Q02535 119 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 RNFT1Q5M7Z0 435 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 ZNF324BQ6AW86 544 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 ADAM5Q6NVV9 412 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 CXorf67Q86X51 503 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 DSPP15924 2871 aaKnown RBP13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 C21orf140B9A014 251 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 KLRC4-KLRK1H3BQV0 150 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 WDR1O75083 606 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 GRPP07492 148 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 ZNF14P17017 642 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 ARG2P78540 354 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 GTF3C1Q12789 2109 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 AKR1C8PQ5T2L2 129 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 DBX2Q6ZNG2 339 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 OR5D13Q8NGL4 314 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 IFT22Q9H7X7 185 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 SPRR3Q9UBC9 169 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 KLF13Q9Y2Y9 288 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 MPC1Q9Y5U8 109 aa13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 KLF2Q9Y5W3 355 aaPredicted RBP13.33□□□□□ -0.28
ARHGEF40-203ENST00000554514 BDP1A6H8Y1 2624 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 KMT2EQ8IZD2 1858 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 TNRC6AQ8NDV7 1962 aaKnown RBP13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 A0A1W2PPE3 182 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 RBFOX3A6NFN3 312 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 CDIPTO14735 213 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 EIF3GO75821 320 aaKnown RBP eCLIP13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 LYZL6O75951 148 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 CD59P13987 128 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 UCP2P55851 309 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 Q6ZRM9 215 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 THNSL2Q86YJ6 484 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 PLK3Q9H4B4 646 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 CACNG5Q9UF02 275 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 OR5B21A6NL26 309 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 TXNL1O43396 289 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 PAX9P55771 341 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 FBXW9Q5XUX1 488 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 WDR86Q86TI4 376 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 OR10V1Q8NGI7 309 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 OR51I2Q9H344 312 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 RNF122Q9H9V4 155 aa13.32□□□□□ -0.28
ARHGEF40-203ENST00000554514 HES3Q5TGS1 186 aa13.31□□□□□ -0.28
ARHGEF40-203ENST00000554514 SPSB3Q6PJ21 355 aa13.31□□□□□ -0.28
ARHGEF40-203ENST00000554514 CACNA1DQ01668 2161 aa13.31□□□□□ -0.28
ARHGEF40-203ENST00000554514 SPENQ96T58 3664 aaKnown RBP13.31□□□□□ -0.28
ARHGEF40-203ENST00000554514 NXPH2O95156 264 aa13.31□□□□□ -0.28
ARHGEF40-203ENST00000554514 OR2H2O95918 312 aa13.31□□□□□ -0.28
ARHGEF40-203ENST00000554514 CD46P15529 392 aa13.31□□□□□ -0.28
ARHGEF40-203ENST00000554514 IL24Q13007 206 aa13.31□□□□□ -0.28
ARHGEF40-203ENST00000554514 OR2B11Q5JQS5 317 aa13.31□□□□□ -0.28
ARHGEF40-203ENST00000554514 STX12Q86Y82 276 aa13.31□□□□□ -0.28
ARHGEF40-203ENST00000554514 H1FOOQ8IZA3 346 aaPredicted RBP13.31□□□□□ -0.28
ARHGEF40-203ENST00000554514 SCCPDHQ8NBX0 429 aa13.31□□□□□ -0.28
ARHGEF40-203ENST00000554514 BCL2L2Q92843 193 aaPredicted RBP13.31□□□□□ -0.28
ARHGEF40-203ENST00000554514 RIMS4Q9H426 269 aaPredicted RBP13.31□□□□□ -0.28
ARHGEF40-203ENST00000554514 COA4Q9NYJ1 87 aa13.31□□□□□ -0.28
ARHGEF40-203ENST00000554514 TRGV5A0A0B4J1U4 118 aa13.3□□□□□ -0.28
ARHGEF40-203ENST00000554514 ZNF727A8MUV8 499 aa13.3□□□□□ -0.28
ARHGEF40-203ENST00000554514 TFF1P04155 84 aa13.3□□□□□ -0.28
ARHGEF40-203ENST00000554514 SRSF7Q16629 238 aaKnown RBP eCLIP13.3□□□□□ -0.28
ARHGEF40-203ENST00000554514 FAM53AQ6NSI3 398 aaPredicted RBP13.3□□□□□ -0.28
ARHGEF40-203ENST00000554514 LFNGQ8NES3 379 aa13.3□□□□□ -0.28
ARHGEF40-203ENST00000554514 RSG1Q9BU20 258 aa13.3□□□□□ -0.28
ARHGEF40-203ENST00000554514 RNF150Q9ULK6 438 aa13.3□□□□□ -0.28
ARHGEF40-203ENST00000554514 RNF115Q9Y4L5 304 aa13.3□□□□□ -0.28
ARHGEF40-203ENST00000554514 NBEAQ8NFP9 2946 aa13.3□□□□□ -0.28
ARHGEF40-203ENST00000554514 J3QT63 122 aa13.3□□□□□ -0.28
ARHGEF40-203ENST00000554514 MT-ND4LP03901 98 aa13.3□□□□□ -0.28
ARHGEF40-203ENST00000554514 METTL15P1P0C7V9 234 aa13.3□□□□□ -0.28
ARHGEF40-203ENST00000554514 SP9P0CG40 484 aa13.3□□□□□ -0.28
ARHGEF40-203ENST00000554514 TBC1D28Q2M2D7 210 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms