RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 FAM90A20PA6NIJ5 464 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 FAM90A8PA6NJQ4 464 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 FAM90A7PA6NKC0 464 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 FAM90A22PA8MWA6 464 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 FAM90A12PA8MX19 464 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 FAM90A5PA8MXJ8 464 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 FAM90A23PA8MXZ1 464 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 SIGLEC5O15389 551 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 CSTBP04080 98 aaKnown RBP13.45□□□□□ -0.26
NEK9-204ENST00000554258 FAM90A15PP0C7V4 464 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 FAM90A13PP0C7W8 464 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 FAM90A14PP0C7W9 464 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 FAM90A24PP0C7X0 464 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 DUX4L4P0CJ87 422 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 MGMTP16455 207 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 SERPINA2P20848 420 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 RBM11P57052 281 aaKnown RBP13.45□□□□□ -0.26
NEK9-204ENST00000554258 DYNC1I2Q13409 638 aaKnown RBP13.45□□□□□ -0.26
NEK9-204ENST00000554258 OR10K2Q6IF99 312 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 FAM89BQ8N5H3 189 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 DYNC2LI1Q8TCX1 351 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 KCTD12Q96CX2 325 aaKnown RBP13.45□□□□□ -0.26
NEK9-204ENST00000554258 DGCR14Q96DF8 476 aaKnown RBP13.45□□□□□ -0.26
NEK9-204ENST00000554258 Q96M66 194 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 GAFA1Q96PS6 74 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 CCL13Q99616 98 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 TM2D1Q9BX74 207 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 LIN7BQ9HAP6 207 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 RSL24D1Q9UHA3 163 aaKnown RBP13.45□□□□□ -0.26
NEK9-204ENST00000554258 DAPK2Q9UIK4 370 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 TCF19Q9Y242 345 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 ST3GAL6Q9Y274 331 aa13.45□□□□□ -0.26
NEK9-204ENST00000554258 TMEM272A0A1B0GTI8 110 aa13.44□□□□□ -0.26
NEK9-204ENST00000554258 SH2D1BO14796 132 aa13.44□□□□□ -0.26
NEK9-204ENST00000554258 SNRPBP14678 240 aaKnown RBP13.44□□□□□ -0.26
NEK9-204ENST00000554258 RAB6AP20340 208 aa13.44□□□□□ -0.26
NEK9-204ENST00000554258 RORCP51449 518 aa13.44□□□□□ -0.26
NEK9-204ENST00000554258 BLCAPP62952 87 aa13.44□□□□□ -0.26
NEK9-204ENST00000554258 RPS27AP62979 156 aaKnown RBP13.44□□□□□ -0.26
NEK9-204ENST00000554258 SLC36A1Q7Z2H8 476 aa13.44□□□□□ -0.26
NEK9-204ENST00000554258 LINC00596Q86U02 117 aa13.44□□□□□ -0.26
NEK9-204ENST00000554258 H1FXQ92522 213 aaKnown RBP13.44□□□□□ -0.26
NEK9-204ENST00000554258 MED30Q96HR3 178 aa13.44□□□□□ -0.26
NEK9-204ENST00000554258 BANF2Q9H503 90 aa13.44□□□□□ -0.26
NEK9-204ENST00000554258 ABRACLQ9P1F3 81 aa13.44□□□□□ -0.26
NEK9-204ENST00000554258 RAB22AQ9UL26 194 aa13.44□□□□□ -0.26
NEK9-204ENST00000554258 SMAD5-AS1Q9Y6J3 95 aa13.44□□□□□ -0.26
NEK9-204ENST00000554258 A0A0B4J203 849 aa13.43□□□□□ -0.26
NEK9-204ENST00000554258 NOL3O60936 208 aaKnown RBP13.43□□□□□ -0.26
NEK9-204ENST00000554258 ZNF737O75373 536 aa13.43□□□□□ -0.26
NEK9-204ENST00000554258 CRTAPO75718 401 aaPredicted RBP13.43□□□□□ -0.26
NEK9-204ENST00000554258 HAND1O96004 215 aa13.43□□□□□ -0.26
NEK9-204ENST00000554258 TFF1P04155 84 aa13.43□□□□□ -0.26
NEK9-204ENST00000554258 ZNF182P17025 639 aaPredicted RBP13.43□□□□□ -0.26
NEK9-204ENST00000554258 DUSP1P28562 367 aa13.43□□□□□ -0.26
NEK9-204ENST00000554258 ECI1P42126 302 aa13.43□□□□□ -0.26
NEK9-204ENST00000554258 THBS3P49746 956 aa13.43□□□□□ -0.26
NEK9-204ENST00000554258 PLA2G7Q13093 441 aa13.43□□□□□ -0.26
NEK9-204ENST00000554258 MPV17LQ2QL34 196 aa13.43□□□□□ -0.26
NEK9-204ENST00000554258 PIGYQ3MUY2 71 aa13.43□□□□□ -0.26
NEK9-204ENST00000554258 IDNKQ5T6J7 187 aa13.43□□□□□ -0.26
NEK9-204ENST00000554258 ZNF561Q8N587 486 aa13.43□□□□□ -0.26
NEK9-204ENST00000554258 LPAR5Q9H1C0 372 aa13.43□□□□□ -0.26
NEK9-204ENST00000554258 KCNK15Q9H427 330 aa13.43□□□□□ -0.26
NEK9-204ENST00000554258 GLS2Q9UI32 602 aa13.43□□□□□ -0.26
NEK9-204ENST00000554258 TMEM82A0PJX8 343 aa13.42□□□□□ -0.26
NEK9-204ENST00000554258 FOXI3A8MTJ6 420 aaPredicted RBP13.42□□□□□ -0.26
NEK9-204ENST00000554258 K7N7A8 449 aa13.42□□□□□ -0.26
NEK9-204ENST00000554258 M0R1W7 72 aa13.42□□□□□ -0.26
NEK9-204ENST00000554258 GEMIN2O14893 280 aaKnown RBP13.42□□□□□ -0.26
NEK9-204ENST00000554258 OR2H2O95918 312 aa13.42□□□□□ -0.26
NEK9-204ENST00000554258 GABRA2P47869 451 aa13.42□□□□□ -0.26
NEK9-204ENST00000554258 CEBPDP49716 269 aaPredicted RBP13.42□□□□□ -0.26
NEK9-204ENST00000554258 PLA1AQ53H76 456 aa13.42□□□□□ -0.26
NEK9-204ENST00000554258 SIGIRRQ6IA17 410 aa13.42□□□□□ -0.26
NEK9-204ENST00000554258 HCP5Q6MZN7 132 aa13.42□□□□□ -0.26
NEK9-204ENST00000554258 CHST4Q8NCG5 386 aa13.42□□□□□ -0.26
NEK9-204ENST00000554258 SNX22Q96L94 193 aa13.42□□□□□ -0.26
NEK9-204ENST00000554258 TMEM59Q9BXS4 323 aa13.42□□□□□ -0.26
NEK9-204ENST00000554258 SELENOIQ9C0D9 397 aa13.42□□□□□ -0.26
NEK9-204ENST00000554258 BATF3Q9NR55 127 aa13.42□□□□□ -0.26
NEK9-204ENST00000554258 RCC2Q9P258 522 aaKnown RBP13.42□□□□□ -0.26
NEK9-204ENST00000554258 OR14J1Q9UGF5 321 aa13.42□□□□□ -0.26
NEK9-204ENST00000554258 PITPNC1Q9UKF7 332 aa13.42□□□□□ -0.26
NEK9-204ENST00000554258 SPATA2Q9UM82 520 aa13.42□□□□□ -0.26
NEK9-204ENST00000554258 ETV7Q9Y603 341 aa13.42□□□□□ -0.26
NEK9-204ENST00000554258 A0A0A6YYD4 124 aa13.41□□□□□ -0.26
NEK9-204ENST00000554258 TRAV24A0A0B4J272 114 aa13.41□□□□□ -0.26
NEK9-204ENST00000554258 A6NDX4 124 aa13.41□□□□□ -0.26
NEK9-204ENST00000554258 NKX6-3A6NJ46 265 aa13.41□□□□□ -0.26
NEK9-204ENST00000554258 DEGS1O15121 323 aa13.41□□□□□ -0.26
NEK9-204ENST00000554258 NDUFB3O43676 98 aa13.41□□□□□ -0.26
NEK9-204ENST00000554258 GLAP06280 429 aa13.41□□□□□ -0.26
NEK9-204ENST00000554258 RAB13P51153 203 aa13.41□□□□□ -0.26
NEK9-204ENST00000554258 IKZF1Q13422 519 aa13.41□□□□□ -0.26
NEK9-204ENST00000554258 FAM216BQ8N7L0 139 aa13.41□□□□□ -0.26
NEK9-204ENST00000554258 OR5H6Q8NGV6 325 aa13.41□□□□□ -0.26
NEK9-204ENST00000554258 ACOT12Q8WYK0 555 aa13.41□□□□□ -0.26
NEK9-204ENST00000554258 FAM46BQ96A09 425 aa13.41□□□□□ -0.26
NEK9-204ENST00000554258 URM1Q9BTM9 101 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms