RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 RGP1Q92546 391 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-224ENST00000554040 RCN3Q96D15 328 aa5.17□□□□□ -1.58
ATXN3-224ENST00000554040 BORCS8Q96FH0 119 aa5.17□□□□□ -1.58
ATXN3-224ENST00000554040 MBOAT4Q96T53 435 aa5.17□□□□□ -1.58
ATXN3-224ENST00000554040 KCTD14Q9BQ13 255 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-224ENST00000554040 YIPF3Q9GZM5 350 aa5.17□□□□□ -1.58
ATXN3-224ENST00000554040 COMMD4Q9H0A8 199 aa5.17□□□□□ -1.58
ATXN3-224ENST00000554040 NCOR1P1Q9H4R4 102 aa5.17□□□□□ -1.58
ATXN3-224ENST00000554040 PLEKHA3Q9HB20 300 aa5.17□□□□□ -1.58
ATXN3-224ENST00000554040 PLEKHA1Q9HB21 404 aa5.17□□□□□ -1.58
ATXN3-224ENST00000554040 HMG20AQ9NP66 347 aa5.17□□□□□ -1.58
ATXN3-224ENST00000554040 SAR1AQ9NR31 198 aa5.17□□□□□ -1.58
ATXN3-224ENST00000554040 APOBP04114 4563 aaKnown RBP5.16□□□□□ -1.58
ATXN3-224ENST00000554040 IGHV7-81A0A0B4J1V7 117 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 A0A1B0GVY2 172 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 PRR32B1ATL7 298 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 SLC33A1O00400 549 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-224ENST00000554040 NDUFAB1O14561 156 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 SOX15O60248 233 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 SRSF10O75494 262 aaKnown RBP5.16□□□□□ -1.58
ATXN3-224ENST00000554040 GATBO75879 557 aaKnown RBP5.16□□□□□ -1.58
ATXN3-224ENST00000554040 TPPPO94811 219 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 SOX14O95416 240 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 CYB5AP00167 134 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 IGHV3-11P01762 117 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 ZNF44P15621 663 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 CCL1P22362 96 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 GLP1RP43220 463 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 ATP1B3P54709 279 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 EWSR1Q01844 656 aaKnown RBP eCLIP5.16□□□□□ -1.58
ATXN3-224ENST00000554040 ATXN7L3Q14CW9 347 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-224ENST00000554040 C4orf46Q504U0 113 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 C8orf82Q6P1X6 216 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-224ENST00000554040 LINC00336Q6ZUF6 198 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 Q8N402 240 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 LINC00311Q8N616 119 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 CHST4Q8NCG5 386 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 OR13A1Q8NGR1 328 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 RTN4IP1Q8WWV3 396 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-224ENST00000554040 MCUR1Q96AQ8 359 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 OVOL2Q9BRP0 275 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 PPIL3Q9H2H8 161 aaKnown RBP5.16□□□□□ -1.58
ATXN3-224ENST00000554040 MOB1AQ9H8S9 216 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 GORASP2Q9H8Y8 452 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 SLC25A19Q9HC21 320 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 PARP11Q9NR21 331 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 INTS9Q9NV88 658 aaKnown RBP5.16□□□□□ -1.58
ATXN3-224ENST00000554040 ETAA1Q9NY74 926 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 SIGLEC8Q9NYZ4 499 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 OR52A1Q9UKL2 312 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 V9GYQ6 96 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 UBR4Q5T4S7 5183 aa5.16□□□□□ -1.58
ATXN3-224ENST00000554040 MEIKINA0A087WXM9 373 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 A0A1W2PN81 502 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 IZUMO1RA6ND01 250 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 LOC110117498-PIK3R3F6TDL0 507 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 TNFRSF11BO00300 401 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 DEGS1O15121 323 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 GMNNO75496 209 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 CCNB2O95067 398 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 SCGB1D2O95969 90 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 SERPINA3P01011 423 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 HLA-DRB1P01911 266 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 FABP3P05413 133 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 CPEP16870 476 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 ZP3P21754 424 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 BLVRBP30043 206 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-224ENST00000554040 CHRNA7P36544 502 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 VHLP40337 213 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 RBP2P50120 134 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 MTCP1P56278 107 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 CD81P60033 236 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 PDZK1IP1Q13113 114 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 KLF5Q13887 457 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-224ENST00000554040 MMDQ15546 238 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 TOR2AQ5JU69 321 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 SLC35D3Q5M8T2 416 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 BCL2L15Q5TBC7 163 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 LCN12Q6JVE5 192 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 RDH10Q8IZV5 341 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 DEFB125Q8N687 156 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 IQCF1Q8N6M8 205 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 TCTEX1D1Q8N7M0 179 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 AQP11Q8NBQ7 271 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 DNAAF1Q8NEP3 725 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 OR51T1Q8NGJ9 327 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 OR9G4Q8NGQ1 327 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 CASTOR1Q8WTX7 329 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 DYDC1Q8WWB3 177 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 ASB17Q8WXJ9 295 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 SPACA5Q96QH8 159 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 NEURL2Q9BR09 285 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 DGCR6LQ9BY27 220 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 BARHL1Q9BZE3 327 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 SRD5A3Q9H8P0 318 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 RANGRFQ9HD47 186 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-224ENST00000554040 KIF25Q9UIL4 384 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 GTF2A1LQ9UNN4 478 aa5.15□□□□□ -1.59
ATXN3-224ENST00000554040 FOXA2Q9Y261 457 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-224ENST00000554040 ERGIC3Q9Y282 383 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms