RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 RFKQ969G6 155 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 C4orf36Q96KX1 117 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 GABARAPL1Q9H0R8 117 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 OR51J1Q9H342 316 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 RIBC2Q9H4K1 309 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 POMPQ9Y244 141 aa7.01□□□□□ -1.29
SYNE2-209ENST00000553308 IGHV7-81A0A0B4J1V7 117 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 TRAV41A0A0B4J266 112 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 FAM90A10PA6NDY2 464 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 LINC01619G3V211 115 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 J3QRE1 110 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 TXNL1O43396 289 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 SOX15O60248 233 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 OR7C1O76099 320 aaPredicted RBP7□□□□□ -1.29
SYNE2-209ENST00000553308 CDRT1O95170 752 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 BLVRBP30043 206 aaPredicted RBP7□□□□□ -1.29
SYNE2-209ENST00000553308 VEGFCP49767 419 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 ZNF134P52741 427 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 RBM11P57052 281 aaKnown RBP7□□□□□ -1.29
SYNE2-209ENST00000553308 GALEQ14376 348 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 ATP6AP1Q15904 470 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 CT45A1Q5HYN5 189 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 SATL1Q86VE3 508 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 SERPINA12Q8IW75 414 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 Q8N1Y9 231 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 OR10V1Q8NGI7 309 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 OR5D14Q8NGL3 314 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 CT45A3Q8NHU0 189 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 TSEN15Q8WW01 171 aaKnown RBP7□□□□□ -1.29
SYNE2-209ENST00000553308 RITA1Q96K30 269 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 GPER1Q99527 375 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 CHCHD6Q9BRQ6 235 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 GABARAPL3Q9BY60 117 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 TOLLIPQ9H0E2 274 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 TPSG1Q9NRR2 321 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 C19orf73Q9NVV2 129 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 NKX1-2Q9UD57 310 aaPredicted RBP7□□□□□ -1.29
SYNE2-209ENST00000553308 ENOPH1Q9UHY7 261 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 ST3GAL6Q9Y274 331 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 LYSTQ99698 3801 aa7□□□□□ -1.29
SYNE2-209ENST00000553308 DNAH1Q9P2D7 4330 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 C12orf77C9JDV5 145 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 AIPO00170 330 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 GEMIN2O14893 280 aaKnown RBP6.99□□□□□ -1.29
SYNE2-209ENST00000553308 ORC5O43913 435 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 JTBO76095 146 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 HLA-DRB1P01911 266 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 LGALS1P09382 135 aaKnown RBP6.99□□□□□ -1.29
SYNE2-209ENST00000553308 OR8U9P0C7N5 309 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 RAB3AP20336 220 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 ACTBP60709 375 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 PITPNAQ00169 270 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 NDPQ00604 133 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 ECSCRQ19T08 205 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 Q3ZCU0 254 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 ATAD3CQ5T2N8 411 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 ZNF529Q6P280 563 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 ASCL4Q6XD76 172 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 AMIGO2Q86SJ2 522 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 ZDHHC13Q8IUH4 622 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 MINDY2Q8NBR6 621 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 OR52N1Q8NH53 320 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 NEK7Q8TDX7 302 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 CPNE2Q96FN4 548 aaPredicted RBP6.99□□□□□ -1.29
SYNE2-209ENST00000553308 PDCD1LG2Q9BQ51 273 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 ANKRD60Q9BZ19 345 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 GHITMQ9H3K2 345 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 IFT22Q9H7X7 185 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 TAS2R4Q9NYW5 299 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 GNG12Q9UBI6 72 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 DHDHQ9UQ10 334 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 FBXO7Q9Y3I1 522 aa6.99□□□□□ -1.29
SYNE2-209ENST00000553308 A0A1W2PN81 502 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 A0A1W2PP11 408 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 TMEM212A6NML5 194 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 A8MZ25 164 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 E9PI62 339 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 NBR2O15453 112 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 MAGEB3O15480 346 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 GYG2O15488 501 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 LANCL1O43813 399 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 IGHV3-11P01762 117 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 MT-ND4P03905 459 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 SERPINA2P20848 420 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 CHRNA7P36544 502 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 SOX2P48431 317 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 C19orf54Q5BKX5 351 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 NHLRC3Q5JS37 347 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 ZNF497Q6ZNH5 498 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 LYPD6Q86Y78 171 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 SGPP2Q8IWX5 399 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 PRR18Q8N4B5 295 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 ACBD7Q8N6N7 88 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 CCDC197Q8NCU1 140 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 OR5AK2Q8NH90 309 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 OR1L1Q8NH94 360 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 OR4C12Q96R67 309 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 SPATA25Q9BR10 227 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 ALG8Q9BVK2 526 aa6.98□□□□□ -1.29
SYNE2-209ENST00000553308 MRPL20Q9BYC9 149 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms