RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 Q3ZCU0 254 aa12.64□□□□□ -0.39
RAB5C-209ENST00000552162 SLC25A48Q6ZT89 311 aaKnown RBP12.64□□□□□ -0.39
RAB5C-209ENST00000552162 OR6Q1Q8NGQ2 317 aa12.64□□□□□ -0.39
RAB5C-209ENST00000552162 CCDC107Q8WV48 283 aa12.64□□□□□ -0.39
RAB5C-209ENST00000552162 TSEN15Q8WW01 171 aaKnown RBP12.64□□□□□ -0.39
RAB5C-209ENST00000552162 DLX4Q92988 240 aaPredicted RBP12.64□□□□□ -0.39
RAB5C-209ENST00000552162 ALX4Q9H161 411 aaPredicted RBP12.64□□□□□ -0.39
RAB5C-209ENST00000552162 OR51J1Q9H342 316 aa12.64□□□□□ -0.39
RAB5C-209ENST00000552162 IFT22Q9H7X7 185 aa12.64□□□□□ -0.39
RAB5C-209ENST00000552162 EDA2RQ9HAV5 297 aa12.64□□□□□ -0.39
RAB5C-209ENST00000552162 CHCHD3Q9NX63 227 aaKnown RBP12.64□□□□□ -0.39
RAB5C-209ENST00000552162 DHDHQ9UQ10 334 aa12.64□□□□□ -0.39
RAB5C-209ENST00000552162 ST3GAL6Q9Y274 331 aa12.64□□□□□ -0.39
RAB5C-209ENST00000552162 ATP6V0E1O15342 81 aa12.63□□□□□ -0.39
RAB5C-209ENST00000552162 MAGEB3O15480 346 aa12.63□□□□□ -0.39
RAB5C-209ENST00000552162 ORC5O43913 435 aa12.63□□□□□ -0.39
RAB5C-209ENST00000552162 RAB3AP20336 220 aa12.63□□□□□ -0.39
RAB5C-209ENST00000552162 RAB9AP51151 201 aa12.63□□□□□ -0.39
RAB5C-209ENST00000552162 SLURP1P55000 103 aa12.63□□□□□ -0.39
RAB5C-209ENST00000552162 RBM11P57052 281 aaKnown RBP12.63□□□□□ -0.39
RAB5C-209ENST00000552162 SRSF7Q16629 238 aaKnown RBP eCLIP12.63□□□□□ -0.39
RAB5C-209ENST00000552162 ZNF439Q8NDP4 499 aa12.63□□□□□ -0.39
RAB5C-209ENST00000552162 OR51A2Q8NGJ7 313 aa12.63□□□□□ -0.39
RAB5C-209ENST00000552162 PARP11Q9NR21 331 aa12.63□□□□□ -0.39
RAB5C-209ENST00000552162 HYDINQ4G0P3 5121 aa12.62□□□□□ -0.39
RAB5C-209ENST00000552162 TMEM212A6NML5 194 aa12.62□□□□□ -0.39
RAB5C-209ENST00000552162 LDLRAD4O15165 306 aa12.62□□□□□ -0.39
RAB5C-209ENST00000552162 CDRT1O95170 752 aa12.62□□□□□ -0.39
RAB5C-209ENST00000552162 FASP25445 335 aa12.62□□□□□ -0.39
RAB5C-209ENST00000552162 VHLP40337 213 aa12.62□□□□□ -0.39
RAB5C-209ENST00000552162 LSAMPQ13449 338 aa12.62□□□□□ -0.39
RAB5C-209ENST00000552162 GALEQ14376 348 aa12.62□□□□□ -0.39
RAB5C-209ENST00000552162 NHLRC3Q5JS37 347 aa12.62□□□□□ -0.39
RAB5C-209ENST00000552162 ASCL4Q6XD76 172 aa12.62□□□□□ -0.39
RAB5C-209ENST00000552162 AMIGO2Q86SJ2 522 aa12.62□□□□□ -0.39
RAB5C-209ENST00000552162 ACBD7Q8N6N7 88 aa12.62□□□□□ -0.39
RAB5C-209ENST00000552162 NEK7Q8TDX7 302 aa12.62□□□□□ -0.39
RAB5C-209ENST00000552162 ARPC1AQ92747 370 aa12.62□□□□□ -0.39
RAB5C-209ENST00000552162 PDCD1LG2Q9BQ51 273 aa12.62□□□□□ -0.39
RAB5C-209ENST00000552162 GHITMQ9H3K2 345 aa12.62□□□□□ -0.39
RAB5C-209ENST00000552162 IMPAD1Q9NX62 359 aa12.62□□□□□ -0.39
RAB5C-209ENST00000552162 TRAV41A0A0B4J266 112 aa12.61□□□□□ -0.39
RAB5C-209ENST00000552162 FAM90A10PA6NDY2 464 aa12.61□□□□□ -0.39
RAB5C-209ENST00000552162 LINC01619G3V211 115 aa12.61□□□□□ -0.39
RAB5C-209ENST00000552162 AIPO00170 330 aa12.61□□□□□ -0.39
RAB5C-209ENST00000552162 GEMIN2O14893 280 aaKnown RBP12.61□□□□□ -0.39
RAB5C-209ENST00000552162 HLA-DRB1P01911 266 aa12.61□□□□□ -0.39
RAB5C-209ENST00000552162 RPSAP08865 295 aaKnown RBP12.61□□□□□ -0.39
RAB5C-209ENST00000552162 ZNF134P52741 427 aa12.61□□□□□ -0.39
RAB5C-209ENST00000552162 ATAD3CQ5T2N8 411 aa12.61□□□□□ -0.39
RAB5C-209ENST00000552162 ZNF529Q6P280 563 aa12.61□□□□□ -0.39
RAB5C-209ENST00000552162 ACSM6Q6P461 480 aa12.61□□□□□ -0.39
RAB5C-209ENST00000552162 LINC00596Q86U02 117 aa12.61□□□□□ -0.39
RAB5C-209ENST00000552162 OR10V1Q8NGI7 309 aa12.61□□□□□ -0.39
RAB5C-209ENST00000552162 OR52N1Q8NH53 320 aa12.61□□□□□ -0.39
RAB5C-209ENST00000552162 OR5AK2Q8NH90 309 aa12.61□□□□□ -0.39
RAB5C-209ENST00000552162 MRPL48Q96GC5 212 aaKnown RBP12.61□□□□□ -0.39
RAB5C-209ENST00000552162 ALG8Q9BVK2 526 aa12.61□□□□□ -0.39
RAB5C-209ENST00000552162 TAS2R4Q9NYW5 299 aa12.61□□□□□ -0.39
RAB5C-209ENST00000552162 GNG12Q9UBI6 72 aa12.61□□□□□ -0.39
RAB5C-209ENST00000552162 IGHV7-81A0A0B4J1V7 117 aa12.6□□□□□ -0.39
RAB5C-209ENST00000552162 MAGEA13PA6NCF6 341 aa12.6□□□□□ -0.39
RAB5C-209ENST00000552162 CSTBP04080 98 aaKnown RBP12.6□□□□□ -0.39
RAB5C-209ENST00000552162 OR8U9P0C7N5 309 aa12.6□□□□□ -0.39
RAB5C-209ENST00000552162 IGHV4-30-4P0DP06 118 aa12.6□□□□□ -0.39
RAB5C-209ENST00000552162 BLVRBP30043 206 aaPredicted RBP12.6□□□□□ -0.39
RAB5C-209ENST00000552162 ACTBP60709 375 aa12.6□□□□□ -0.39
RAB5C-209ENST00000552162 CT45A1Q5HYN5 189 aa12.6□□□□□ -0.39
RAB5C-209ENST00000552162 ZNF497Q6ZNH5 498 aa12.6□□□□□ -0.39
RAB5C-209ENST00000552162 CT45A3Q8NHU0 189 aa12.6□□□□□ -0.39
RAB5C-209ENST00000552162 TRUB1Q8WWH5 349 aaKnown RBP12.6□□□□□ -0.39
RAB5C-209ENST00000552162 TOLLIPQ9H0E2 274 aa12.6□□□□□ -0.39
RAB5C-209ENST00000552162 METTL9Q9H1A3 318 aa12.6□□□□□ -0.39
RAB5C-209ENST00000552162 ISG20L2Q9H9L3 353 aaKnown RBP12.6□□□□□ -0.39
RAB5C-209ENST00000552162 IL36GQ9NZH8 169 aa12.6□□□□□ -0.39
RAB5C-209ENST00000552162 ING4Q9UNL4 249 aa12.6□□□□□ -0.39
RAB5C-209ENST00000552162 MRPS28Q9Y2Q9 187 aaKnown RBP12.6□□□□□ -0.39
RAB5C-209ENST00000552162 IGHV4OR15-8A0A075B7B6 117 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 A0A087WW49 117 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 C12orf77C9JDV5 145 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 SPINT2O43291 252 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 LANCL1O43813 399 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 MT-ND4P03905 459 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 SERPINA2P20848 420 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 CNTFRP26992 372 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 VEGFCP49767 419 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 PITPNAQ00169 270 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 MPV17LQ2QL34 196 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 TMEM30BQ3MIR4 351 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 LHFPL3Q86UP9 236 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 SYS1Q8N2H4 156 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 PRR18Q8N4B5 295 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 MINDY2Q8NBR6 621 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 SLC7A6OSQ96CW6 309 aaPredicted RBP12.59□□□□□ -0.39
RAB5C-209ENST00000552162 LGALS12Q96DT0 336 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 JAM3Q9BX67 310 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 ANKRD60Q9BZ19 345 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 RAB9BQ9NP90 201 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 OAZ3Q9UMX2 235 aa12.59□□□□□ -0.39
RAB5C-209ENST00000552162 EXOGQ9Y2C4 368 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms