RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 C17orf50Q8WW18 174 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 GCDHQ92947 438 aaPredicted RBP8.62□□□□□ -1.03
PTCH1-225ENST00000551845 RAB3CQ96E17 227 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 SSX3Q99909 188 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 ATG5Q9H1Y0 275 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 CHMP1AQ9HD42 196 aaPredicted RBP8.62□□□□□ -1.03
PTCH1-225ENST00000551845 ZNRD1Q9P1U0 126 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 DPM3Q9P2X0 92 aa8.62□□□□□ -1.03
PTCH1-225ENST00000551845 A0A0A6YYD4 124 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 A0A0B4J203 849 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 FAM172BPA6NC97 362 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 POM121CA8CG34 1229 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 J3QR06 171 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 SDCBPO00560 298 aaPredicted RBP8.61□□□□□ -1.03
PTCH1-225ENST00000551845 IGHV4-59P01825 116 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 SMIM18P0DKX4 95 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 RCC1P18754 421 aaPredicted RBP8.61□□□□□ -1.03
PTCH1-225ENST00000551845 RPS19P39019 145 aaKnown RBP8.61□□□□□ -1.03
PTCH1-225ENST00000551845 CEACAM3P40198 252 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 SCAND1P57086 179 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 ARL6IP1Q15041 203 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 TMEM30BQ3MIR4 351 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 BAIAP2L2Q6UXY1 529 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 PRR18Q8N4B5 295 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 C3orf56Q8N813 242 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 OR10R2Q8NGX6 335 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 MRPL30Q8TCC3 161 aaKnown RBP8.61□□□□□ -1.03
PTCH1-225ENST00000551845 PHF21AQ96BD5 680 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 GALMQ96C23 342 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 AJUBAQ96IF1 538 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 ARHGAP5-AS1Q96IT6 56 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 CMSS1Q9BQ75 279 aaKnown RBP8.61□□□□□ -1.03
PTCH1-225ENST00000551845 PECRQ9BY49 303 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 TAF9BQ9HBM6 251 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 ZNF286AQ9HBT8 521 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 ABCB10Q9NRK6 738 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 MBNL3Q9NUK0 354 aaKnown RBP8.61□□□□□ -1.03
PTCH1-225ENST00000551845 PSG11Q9UQ72 335 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 HILPDAQ9Y5L2 63 aa8.61□□□□□ -1.03
PTCH1-225ENST00000551845 SVEP1Q4LDE5 3571 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 FOXI3A8MTJ6 420 aaPredicted RBP8.6□□□□□ -1.03
PTCH1-225ENST00000551845 C12orf77C9JDV5 145 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 BUB1B-PAK6H3BSN5 160 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 RAB27BO00194 218 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 F2RL2O00254 374 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 SCGNO76038 276 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 IGLV1-47P01700 117 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 IGHV3-7P01780 117 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 HBZP02008 142 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 SNRPBP14678 240 aaKnown RBP8.6□□□□□ -1.03
PTCH1-225ENST00000551845 ARHGDIBP52566 201 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 EFNB2P52799 333 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 ACTG1P63261 375 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 PLA2G7Q13093 441 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 LRRC75BQ2VPJ9 315 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 HLA-DRB5Q30154 266 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 Q3ZCU0 254 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 PLAC9Q5JTB6 97 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 GPR141Q7Z602 305 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 ANKRD13BQ86YJ7 626 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 OR4P4Q8NGL7 312 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 SETD6Q8TBK2 473 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 CHIAQ9BZP6 476 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 MMP28Q9H239 520 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 OR2S2Q9NQN1 319 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 GFOD1Q9NXC2 390 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 ABRACLQ9P1F3 81 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 GNG12Q9UBI6 72 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 AK3Q9UIJ7 227 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 MGAT4AQ9UM21 535 aa8.6□□□□□ -1.03
PTCH1-225ENST00000551845 A0A075B6Q4 140 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 TRBV6-6A0A0A6YYG2 114 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 TMEM89A2RUT3 159 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 FAM181BA6NEQ2 426 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 VGLL3A8MV65 326 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 H3BUX3 64 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 NAPSAO96009 420 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 TFAP2AP05549 437 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 CD3GP09693 182 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 BRS3P32247 399 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 TGFBR1P36897 503 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 ALDH3B2P48448 385 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 SERPINB10P48595 397 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 RAB13P51153 203 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 LOXL3P58215 753 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 VBP1P61758 197 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 HTD2P86397 168 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 FOXL1Q12952 345 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 MOGAT2Q3SYC2 334 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 CDNFQ49AH0 187 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 PDLIM3Q53GG5 364 aaPredicted RBP8.59□□□□□ -1.03
PTCH1-225ENST00000551845 GPR107Q5VW38 600 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 STEAP3Q658P3 488 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 OR1L1Q8NH94 360 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 UBALD1Q8TB05 177 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 LEAP2Q969E1 77 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 SPATA2Q9UM82 520 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 AMMECR1Q9Y4X0 333 aaPredicted RBP8.59□□□□□ -1.03
PTCH1-225ENST00000551845 ETV7Q9Y603 341 aa8.59□□□□□ -1.03
PTCH1-225ENST00000551845 IGHV3-43A0A0B4J1X8 118 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms