RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 LCN12Q6JVE5 192 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 SLC35D2Q76EJ3 337 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 FAM122BQ7Z309 247 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 LRRC6Q86X45 466 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 C1orf174Q8IYL3 243 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 C6orf223Q8N319 242 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 MREGQ8N565 214 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 TBC1D19Q8N5T2 526 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 HSD17B11Q8NBQ5 300 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 WFDC9Q8NEX5 89 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 OR6K6Q8NGW6 343 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 CT45A3Q8NHU0 189 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 DCUN1D4Q92564 292 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 POP5Q969H6 163 aaKnown RBP2.77□□□□□ -1.97
LIMA1-208ENST00000551691 TMEM230Q96A57 120 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 FAM3DQ96BQ1 224 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 VSIG2Q96IQ7 327 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 MAGEB18Q96M61 343 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 RNF145Q96MT1 663 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 PAXXQ9BUH6 204 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 NDEL1Q9GZM8 345 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 OR51B5Q9H339 312 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 OR51J1Q9H342 316 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 ARMC7Q9H6L4 198 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 PARVBQ9HBI1 364 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 FBXO6Q9NRD1 293 aaPredicted RBP2.77□□□□□ -1.97
LIMA1-208ENST00000551691 CLN6Q9NWW5 311 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 RCL1Q9Y2P8 373 aaKnown RBP2.77□□□□□ -1.97
LIMA1-208ENST00000551691 GMEB1Q9Y692 573 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 DNAH11Q96DT5 4516 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 PKD1P98161 4303 aa2.77□□□□□ -1.97
LIMA1-208ENST00000551691 hCG_1818297A0A087WSY0 165 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 A0A0G2JLM5 398 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 A0A0J9YXY3 114 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 OR6C70A6NIJ9 312 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 BTNL10A8MVZ5 291 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 HACD1B0YJ81 288 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 SMKR1H3BMG3 65 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 FADS1O60427 444 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 IGHV3-48P01763 117 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 THY1P04216 161 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 TPM3P06753 285 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 SLC35E2BP0CK96 405 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 FOLR2P14207 255 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 HIST1H1TP22492 207 aaPredicted RBP2.76□□□□□ -1.97
LIMA1-208ENST00000551691 CFHR2P36980 270 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 MARCKSL1P49006 195 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 XKP51811 444 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 APOC4P55056 127 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 CCL8P80075 99 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 KIAA0040Q15053 153 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 OR7A5Q15622 319 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 RFX4Q33E94 735 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 TMEM176BQ3YBM2 270 aaPredicted RBP2.76□□□□□ -1.97
LIMA1-208ENST00000551691 THEM4Q5T1C6 240 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 CPTPQ5TA50 214 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 FBXW9Q5XUX1 488 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 PPP1R2P3Q6NXS1 205 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 NPSR1Q6W5P4 371 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 H2AFVQ71UI9 128 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 COMTD1Q86VU5 262 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 SBSPONQ8IVN8 264 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 PNKDQ8N490 385 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 RPP25LQ8N5L8 163 aaKnown RBP2.76□□□□□ -1.97
LIMA1-208ENST00000551691 DUSP18Q8NEJ0 188 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 OR4F15Q8NGB8 312 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 OR52R1Q8NGF1 315 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 ACTL9Q8TC94 416 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 CD200R1Q8TD46 325 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 RNF138Q8WVD3 245 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 FCRL1Q96LA6 429 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 PRRG3Q9BZD7 231 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 GOLPH3Q9H4A6 298 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 C16orf95Q9H693 158 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 PATZ1Q9HBE1 687 aaKnown RBP2.76□□□□□ -1.97
LIMA1-208ENST00000551691 SLC7A10Q9NS82 523 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 TREX1Q9NSU2 369 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 SLC17A7Q9P2U7 560 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 CD300AQ9UGN4 299 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 ASB4Q9Y574 426 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 INSIG2Q9Y5U4 225 aa2.76□□□□□ -1.97
LIMA1-208ENST00000551691 TRAV40A0A0B4J280 105 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 KIR2DL5BA0A0G2JN68 375 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 KIR2DL5BA0A0G2JPC4 375 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 A0A1B0GU03 582 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 SYCE1LA8MT33 242 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 RFXANKO14593 260 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 ANGPTL7O43827 346 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 MMP23AO75900 390 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 TTC4O95801 387 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 CECR9P0C854 216 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 CTRB1P17538 263 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 EVI2BP34910 448 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 SSR2P43308 183 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 PPICP45877 212 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 GPR4P46093 362 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 ATP6V0D1P61421 351 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 KIAA0087Q14695 138 aa2.75□□□□□ -1.97
LIMA1-208ENST00000551691 TRIP13Q15645 432 aaPredicted RBP2.75□□□□□ -1.97
LIMA1-208ENST00000551691 RPEL1Q2QD12 228 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms