RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 CHPT1Q8WUD6 406 aa5.32□□□□□ -1.56
PRPF40B-214ENST00000551320 TSEN15Q8WW01 171 aaKnown RBP5.32□□□□□ -1.56
PRPF40B-214ENST00000551320 DCUN1D4Q92564 292 aa5.32□□□□□ -1.56
PRPF40B-214ENST00000551320 ARL11Q969Q4 196 aa5.32□□□□□ -1.56
PRPF40B-214ENST00000551320 NRBF2Q96F24 287 aa5.32□□□□□ -1.56
PRPF40B-214ENST00000551320 GPER1Q99527 375 aa5.32□□□□□ -1.56
PRPF40B-214ENST00000551320 MNTQ99583 582 aa5.32□□□□□ -1.56
PRPF40B-214ENST00000551320 DPCDQ9BVM2 203 aaPredicted RBP5.32□□□□□ -1.56
PRPF40B-214ENST00000551320 AP4S1Q9Y587 144 aa5.32□□□□□ -1.56
PRPF40B-214ENST00000551320 A3GALT2U3KPV4 340 aa5.32□□□□□ -1.56
PRPF40B-214ENST00000551320 NPIPB11E5RHQ5 1161 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 NPIPB6E9PJ23 425 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 C15orf65H3BRN8 121 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 H3BUI4 141 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 OR7C1O76099 320 aaPredicted RBP5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 DUS4LO95620 317 aaKnown RBP5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 IGHV3-11P01762 117 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 RPSAP08865 295 aaKnown RBP5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 SPNP16150 400 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 RCC1P18754 421 aaPredicted RBP5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 FASP25445 335 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 ARHGDIBP52566 201 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 ADARB1P78563 741 aaKnown RBP5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 KIAA0141Q14154 515 aaPredicted RBP5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 RSU1Q15404 277 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 ZNF124Q15973 351 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 SRSF7Q16629 238 aaKnown RBP eCLIP5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 SMN1Q16637 294 aaKnown RBP5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 PNLIPRP3Q17RR3 467 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 CT45A1Q5HYN5 189 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 CXorf66Q5JRM2 361 aaPredicted RBP5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 C1orf146Q5VVC0 180 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 CCDC144NLQ6NUI1 221 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 TMEM104Q8NE00 496 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 OR52L2PQ8NGH6 319 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 OR8J1Q8NGP2 316 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 CT45A3Q8NHU0 189 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 NEK7Q8TDX7 302 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 SPSB1Q96BD6 273 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 KCTD7Q96MP8 289 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 RCHY1Q96PM5 261 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 S1PR3Q99500 378 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 ALG8Q9BVK2 526 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 GABARAPL3Q9BY60 117 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 PRRG3Q9BZD7 231 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 GABARAPL1Q9H0R8 117 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 ABCG5Q9H222 651 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 PARP11Q9NR21 331 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 OR6C3Q9NZP0 311 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 KIAA1456Q9P272 454 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 ST3GAL6Q9Y274 331 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 FBXO7Q9Y3I1 522 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 SELENOKQ9Y6D0 94 aa5.31□□□□□ -1.56
PRPF40B-214ENST00000551320 PNMA8CA0A1B0GUJ8 204 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 UBE2QL1A1L167 161 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 FUOMA2VDF0 154 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 M0QZK8 103 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 AP4M1O00189 453 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 EI24O14681 340 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 ATP8B1O43520 1251 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 SULT1B1O43704 296 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 MT-ND2P03891 347 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 GAPDHP04406 335 aaKnown RBP5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 ISG15P05161 165 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 CSN2P05814 226 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 FRMD6-AS1P0C7T7 363 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 C21orf33P30042 268 aaPredicted RBP5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 OR3A3P47888 321 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 LINC00205P59089 165 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 SLC35B1P78383 322 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 NDPQ00604 133 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 CFHR3Q02985 330 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 KIR2DS1Q14954 304 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 DNAL1Q4LDG9 190 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 SLC22A6Q4U2R8 563 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 C9orf66Q5T8R8 295 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 OR2G6Q5TZ20 316 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 TEX38Q6PEX7 206 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 GLDNQ6ZMI3 551 aaPredicted RBP5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 FOXRED2Q8IWF2 684 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 ZNF565Q8N9K5 539 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 OR5M8Q8NGP6 311 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 OR1N2Q8NGR9 330 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 OR5AK2Q8NH90 309 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 MUC7Q8TAX7 377 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 HAVCR2Q8TDQ0 301 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 RTN4IP1Q8WWV3 396 aaPredicted RBP5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 DNAJC9Q8WXX5 260 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 ARPC1AQ92747 370 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 DLX4Q92988 240 aaPredicted RBP5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 ST6GALNAC6Q969X2 333 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 MS4A10Q96PG2 267 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 RASL11BQ9BPW5 248 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 MCRIP2Q9BUT9 160 aaKnown RBP5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 MRPL20Q9BYC9 149 aaKnown RBP5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 BARHL1Q9BZE3 327 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 KCNK15Q9H427 330 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 BANF2Q9H503 90 aa5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 SEBOXQ9HB31 216 aaPredicted RBP5.3□□□□□ -1.56
PRPF40B-214ENST00000551320 ZFP57Q9NU63 452 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms