RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 ZNF829Q3KNS6 432 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-214ENST00000550893 CXorf66Q5JRM2 361 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-214ENST00000550893 OGFRL1Q5TC84 451 aaPredicted RBP3.86□□□□□ -1.79
SCAF11-214ENST00000550893 OR2G6Q5TZ20 316 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 LPCAT4Q643R3 524 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 UTS2BQ765I0 119 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 C5orf24Q7Z6I8 188 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 BPIFB2Q8N4F0 458 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 Q8NFD4 153 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 OR10H4Q8NGA5 316 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 OR4S1Q8NGB4 309 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 OR8S1Q8NH09 359 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 LINC01006Q8NI28 216 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 SLAMF9Q96A28 289 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 RFT1Q96AA3 541 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 PLEKHA8Q96JA3 519 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 GFI1Q99684 422 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 MICU1Q9BPX6 476 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 PDCD1LG2Q9BQ51 273 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 NEURL2Q9BR09 285 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 MROQ9BYG7 248 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 COMMD4Q9H0A8 199 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 PPIL3Q9H2H8 161 aaKnown RBP3.86□□□□□ -1.79
SCAF11-214ENST00000550893 ZNF696Q9H7X3 374 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 ENPP5Q9UJA9 477 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 LSM2Q9Y333 95 aaKnown RBP3.86□□□□□ -1.79
SCAF11-214ENST00000550893 SIGLEC9Q9Y336 463 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 SNX5Q9Y5X3 404 aa3.86□□□□□ -1.79
SCAF11-214ENST00000550893 TRAV8-7A0A075B6U6 113 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 TRAV24A0A0B4J272 114 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 TRBV2A0A0J9YWF9 115 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 LOC100130705A0A1B0GUX0 176 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 A0A1B0GVI7 797 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 A0A1W2PP11 408 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 NKX6-3A6NJ46 265 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 ANXA2P2A6NMY6 339 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 TRIM77I1YAP6 450 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 GABRPO00591 440 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 NPFFO15130 113 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 NDUFA2O43678 99 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 TSPAN9O75954 239 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 CLPXO76031 633 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 IGLV1-47P01700 117 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 APOHP02749 345 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-214ENST00000550893 IGFBP3P17936 291 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-214ENST00000550893 AZGP1P25311 298 aaKnown RBP3.85□□□□□ -1.79
SCAF11-214ENST00000550893 PRDX2P32119 198 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 HOXA1P49639 335 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-214ENST00000550893 EFNB2P52799 333 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 ACTG1P63261 375 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 INSL4Q14641 139 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 ZNF146Q15072 292 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 MICBQ29980 383 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 C17orf58Q2M2W7 97 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 TMEM95Q3KNT9 176 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 DMKNQ6E0U4 476 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-214ENST00000550893 ZFP1Q6P2D0 407 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 C16orf87Q6PH81 154 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 FIP1L1Q6UN15 594 aaKnown RBP3.85□□□□□ -1.79
SCAF11-214ENST00000550893 ASCL4Q6XD76 172 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 C1orf122Q6ZSJ8 110 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 SLC25A26Q70HW3 274 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 LHFPL3Q86UP9 236 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 SYS1Q8N2H4 156 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 TMEM86BQ8N661 226 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 YIPF7Q8N8F6 280 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 ZSCAN4Q8NAM6 433 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-214ENST00000550893 TMEM185AQ8NFB2 350 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 OR4M1Q8NGD0 313 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 OR5D18Q8NGL1 313 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 OR4P4Q8NGL7 312 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 OR13C9Q8NGT0 318 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 PLPPR1Q8TBJ4 325 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 TMIGD2Q96BF3 282 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 ZNF702PQ9H963 129 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 HMG20AQ9NP66 347 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 ABCB9Q9NP78 766 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 ONECUT1Q9UBC0 465 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 GNG8Q9UK08 70 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 VPREB3Q9UKI3 123 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 NOP16Q9Y3C1 178 aaKnown RBP3.85□□□□□ -1.79
SCAF11-214ENST00000550893 TMEM14AQ9Y6G1 99 aa3.85□□□□□ -1.79
SCAF11-214ENST00000550893 A6NDX4 124 aa3.84□□□□□ -1.79
SCAF11-214ENST00000550893 VGLL3A8MV65 326 aa3.84□□□□□ -1.79
SCAF11-214ENST00000550893 LY6LH3BQJ8 138 aa3.84□□□□□ -1.79
SCAF11-214ENST00000550893 SLC33A1O00400 549 aaPredicted RBP3.84□□□□□ -1.79
SCAF11-214ENST00000550893 OGG1O15527 345 aa3.84□□□□□ -1.79
SCAF11-214ENST00000550893 SYT7O43581 403 aa3.84□□□□□ -1.79
SCAF11-214ENST00000550893 SC5DO75845 299 aa3.84□□□□□ -1.79
SCAF11-214ENST00000550893 ECDO95905 644 aaPredicted RBP3.84□□□□□ -1.79
SCAF11-214ENST00000550893 KRT8P05787 483 aa3.84□□□□□ -1.79
SCAF11-214ENST00000550893 LIPFP07098 398 aa3.84□□□□□ -1.79
SCAF11-214ENST00000550893 UBCP0CG48 685 aaKnown RBP3.84□□□□□ -1.79
SCAF11-214ENST00000550893 FAM106CPP0CH98 169 aa3.84□□□□□ -1.79
SCAF11-214ENST00000550893 CD37P11049 281 aa3.84□□□□□ -1.79
SCAF11-214ENST00000550893 PIPP12273 146 aaPredicted RBP3.84□□□□□ -1.79
SCAF11-214ENST00000550893 IRF2P14316 349 aa3.84□□□□□ -1.79
SCAF11-214ENST00000550893 ZNF182P17025 639 aaPredicted RBP3.84□□□□□ -1.79
SCAF11-214ENST00000550893 ATF1P18846 271 aa3.84□□□□□ -1.79
SCAF11-214ENST00000550893 UBE2E1P51965 193 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms