RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 HNF4GQ14541 408 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 UTF1Q5T230 341 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 RNLSQ5VYX0 342 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 AWAT2Q6E213 333 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 RAB12Q6IQ22 244 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 SLC35E3Q7Z769 313 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 IZUMO1Q8IYV9 350 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 GAPTQ8N292 157 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 CCDC107Q8WV48 283 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 DPF1Q92782 380 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 MUL1Q969V5 352 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 PHF21AQ96BD5 680 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 OR14A2Q96R54 314 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 MCRIP2Q9BUT9 160 aaKnown RBP8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 CST11Q9H112 138 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 LIN7CQ9NUP9 197 aaKnown RBP8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 ETAA1Q9NY74 926 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 KCNIP1Q9NZI2 227 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 RCC2Q9P258 522 aaKnown RBP8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 GNG12Q9UBI6 72 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 PSORS1C1Q9UIG5 152 aa8.63□□□□□ -1.03
VTI1BP3-201ENST00000550220 TRAV8-7A0A075B6U6 113 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 TRAV39A0A0B4J263 110 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 NCBP2LA6PVI3 153 aaKnown RBP8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 AP4M1O00189 453 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 RRP9O43818 475 aaKnown RBP8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 MAS1P04201 325 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 UBBP0CG47 229 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 IGLL1P15814 213 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 RANBP1P43487 201 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 ZNF137PP52743 207 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 GP2P55259 537 aaKnown RBP8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 DIAPH2-AS1Q14236 149 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 RCN1Q15293 331 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 SYT6Q5T7P8 510 aaPredicted RBP8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 FOXB2Q5VYV0 432 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 TEX38Q6PEX7 206 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 Q6ZPA2 131 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 OR13C5Q8NGS8 318 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 FBLIM1Q8WUP2 373 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 ORAI1Q96D31 301 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 EAF1Q96JC9 268 aaPredicted RBP8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 DERL3Q96Q80 235 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 SELENOIQ9C0D9 397 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 PEX16Q9Y5Y5 336 aa8.62□□□□□ -1.03
VTI1BP3-201ENST00000550220 A0A1W2PPK0 400 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 SH2D7A6NKC9 451 aaPredicted RBP8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 CASQ2O14958 399 aaPredicted RBP8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 CRTAPO75718 401 aaPredicted RBP8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 SC5DO75845 299 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 RGS11O94810 467 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 MOSP00540 346 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 MGMTP16455 207 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 MYCNOSP40205 109 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 RPL23AP62750 156 aaKnown RBP8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 DCTN2Q13561 401 aaKnown RBP8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 GPR50Q13585 617 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 PNLIPRP3Q17RR3 467 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 OGFRL1Q5TC84 451 aaPredicted RBP8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 GLT8D1Q68CQ7 371 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 SLC25A48Q6ZT89 311 aaKnown RBP8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 AHSA2Q719I0 299 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 STPG2Q8N412 459 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 NANOGP1Q8N7R0 232 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 ZFP41Q8N8Y5 198 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 BPIFB6Q8NFQ5 453 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 RTN4IP1Q8WWV3 396 aaPredicted RBP8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 ST6GALNAC6Q969X2 333 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 RASL11BQ9BPW5 248 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 CHCHD6Q9BRQ6 235 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 ABCG5Q9H222 651 aa8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 AURKAIP1Q9NWT8 199 aaPredicted RBP8.61□□□□□ -1.03
VTI1BP3-201ENST00000550220 A0A1W2PP11 408 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 A0A1W2PPE3 182 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 MAGEA13PA6NCF6 341 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 C12orf77C9JDV5 145 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 H0YHG0 523 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 LANCL1O43813 399 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 PDCD6O75340 191 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 HBZP02008 142 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 PRB2P02812 416 aaPredicted RBP8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 REG1BP48304 166 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 LY6G6FQ5SQ64 297 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 UNQ9370/PRO34162Q6UXP9 181 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 ZNF329Q86UD4 541 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 LYPD6Q86Y78 171 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 Q8N6K4 173 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 LINC00482Q8N8I6 264 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 OR4K15Q8NH41 348 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 PHYHIPQ92561 330 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 Q96M66 194 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 NEDD4LQ96PU5 975 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 MND1Q9BWT6 205 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 OR2S2Q9NQN1 319 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 MBNL3Q9NUK0 354 aaKnown RBP8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 FKBP14Q9NWM8 211 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 SCN3BQ9NY72 215 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 ZNF581Q9P0T4 197 aa8.6□□□□□ -1.03
VTI1BP3-201ENST00000550220 PNMA8CA0A1B0GUJ8 204 aa8.59□□□□□ -1.03
VTI1BP3-201ENST00000550220 NUDT19A8MXV4 375 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms