RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 TMEM158Q8WZ71 300 aa18.26■□□□□ 0.51
BRF1-216ENST00000550208 RAB3CQ96E17 227 aa18.26■□□□□ 0.51
BRF1-216ENST00000550208 MEGF9Q9H1U4 602 aa18.26■□□□□ 0.51
BRF1-216ENST00000550208 TAF9BQ9HBM6 251 aa18.26■□□□□ 0.51
BRF1-216ENST00000550208 CHMP1AQ9HD42 196 aaPredicted RBP18.26■□□□□ 0.51
BRF1-216ENST00000550208 KCNIP1Q9NZI2 227 aa18.26■□□□□ 0.51
BRF1-216ENST00000550208 TBL2Q9Y4P3 447 aaKnown RBP18.26■□□□□ 0.51
BRF1-216ENST00000550208 IGHV3-43A0A0B4J1X8 118 aa18.25■□□□□ 0.51
BRF1-216ENST00000550208 CLDN34H7C241 214 aa18.25■□□□□ 0.51
BRF1-216ENST00000550208 F2RL2O00254 374 aa18.25■□□□□ 0.51
BRF1-216ENST00000550208 TOR1AO14656 332 aa18.25■□□□□ 0.51
BRF1-216ENST00000550208 SPINT2O43291 252 aa18.25■□□□□ 0.51
BRF1-216ENST00000550208 GABARAPO95166 117 aa18.25■□□□□ 0.51
BRF1-216ENST00000550208 IGLV1-47P01700 117 aa18.25■□□□□ 0.51
BRF1-216ENST00000550208 HBZP02008 142 aa18.25■□□□□ 0.51
BRF1-216ENST00000550208 IGHV3-43DP0DP04 118 aa18.25■□□□□ 0.51
BRF1-216ENST00000550208 GNB3P16520 340 aa18.25■□□□□ 0.51
BRF1-216ENST00000550208 PRRX1P54821 245 aa18.25■□□□□ 0.51
BRF1-216ENST00000550208 ZNF880Q6PDB4 577 aa18.25■□□□□ 0.51
BRF1-216ENST00000550208 PRR18Q8N4B5 295 aa18.25■□□□□ 0.51
BRF1-216ENST00000550208 SETD6Q8TBK2 473 aa18.25■□□□□ 0.51
BRF1-216ENST00000550208 ZNF596Q8TC21 504 aa18.25■□□□□ 0.51
BRF1-216ENST00000550208 MALSU1Q96EH3 234 aa18.25■□□□□ 0.51
BRF1-216ENST00000550208 RIMS4Q9H426 269 aaPredicted RBP18.25■□□□□ 0.51
BRF1-216ENST00000550208 PSG11Q9UQ72 335 aa18.25■□□□□ 0.51
BRF1-216ENST00000550208 A0A075B6Q4 140 aa18.24■□□□□ 0.51
BRF1-216ENST00000550208 SDCBPO00560 298 aaPredicted RBP18.24■□□□□ 0.51
BRF1-216ENST00000550208 RPL5P46777 297 aaKnown RBP18.24■□□□□ 0.51
BRF1-216ENST00000550208 LOXL3P58215 753 aa18.24■□□□□ 0.51
BRF1-216ENST00000550208 SSX2Q16385 188 aa18.24■□□□□ 0.51
BRF1-216ENST00000550208 MINOS1Q5TGZ0 78 aa18.24■□□□□ 0.51
BRF1-216ENST00000550208 TRAT1Q6PIZ9 186 aa18.24■□□□□ 0.51
BRF1-216ENST00000550208 CROCCP3Q8IVE0 287 aa18.24■□□□□ 0.51
BRF1-216ENST00000550208 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.24■□□□□ 0.51
BRF1-216ENST00000550208 OR52M1Q8NGK5 317 aa18.24■□□□□ 0.51
BRF1-216ENST00000550208 OR9G1Q8NH87 305 aa18.24■□□□□ 0.51
BRF1-216ENST00000550208 NDNFQ8TB73 568 aa18.24■□□□□ 0.51
BRF1-216ENST00000550208 FAM216AQ8WUB2 273 aa18.24■□□□□ 0.51
BRF1-216ENST00000550208 ZFAND2BQ8WV99 257 aa18.24■□□□□ 0.51
BRF1-216ENST00000550208 SSMEM1Q8WWF3 244 aa18.24■□□□□ 0.51
BRF1-216ENST00000550208 CMSS1Q9BQ75 279 aaKnown RBP18.24■□□□□ 0.51
BRF1-216ENST00000550208 ZMAT3Q9HA38 289 aaKnown RBP18.24■□□□□ 0.51
BRF1-216ENST00000550208 GFOD1Q9NXC2 390 aa18.24■□□□□ 0.51
BRF1-216ENST00000550208 HILPDAQ9Y5L2 63 aa18.24■□□□□ 0.51
BRF1-216ENST00000550208 MINOS1-NBL1R4GNA1 71 aa18.24■□□□□ 0.51
BRF1-216ENST00000550208 TRBV6-6A0A0A6YYG2 114 aa18.23■□□□□ 0.51
BRF1-216ENST00000550208 A0A1W2PPE3 182 aa18.23■□□□□ 0.51
BRF1-216ENST00000550208 J3QR06 171 aa18.23■□□□□ 0.51
BRF1-216ENST00000550208 RNASE1P07998 156 aaKnown RBP18.23■□□□□ 0.51
BRF1-216ENST00000550208 HTR1DP28221 377 aa18.23■□□□□ 0.51
BRF1-216ENST00000550208 SCAND1P57086 179 aa18.23■□□□□ 0.51
BRF1-216ENST00000550208 TMEM86BQ8N661 226 aa18.23■□□□□ 0.51
BRF1-216ENST00000550208 SLC25A46Q96AG3 418 aa18.23■□□□□ 0.51
BRF1-216ENST00000550208 SSX3Q99909 188 aa18.23■□□□□ 0.51
BRF1-216ENST00000550208 DPAGT1Q9H3H5 408 aa18.23■□□□□ 0.51
BRF1-216ENST00000550208 RHBDL2Q9NX52 303 aa18.23■□□□□ 0.51
BRF1-216ENST00000550208 ABRACLQ9P1F3 81 aa18.23■□□□□ 0.51
BRF1-216ENST00000550208 ETV7Q9Y603 341 aa18.23■□□□□ 0.51
BRF1-216ENST00000550208 MFNGO00587 321 aa18.22■□□□□ 0.51
BRF1-216ENST00000550208 TMEM127O75204 238 aa18.22■□□□□ 0.51
BRF1-216ENST00000550208 HIST1H1DP16402 221 aaKnown RBP18.22■□□□□ 0.51
BRF1-216ENST00000550208 GNG10P50151 68 aa18.22■□□□□ 0.51
BRF1-216ENST00000550208 HLA-DRB5Q30154 266 aa18.22■□□□□ 0.51
BRF1-216ENST00000550208 CDNFQ49AH0 187 aa18.22■□□□□ 0.51
BRF1-216ENST00000550208 PLA1AQ53H76 456 aa18.22■□□□□ 0.51
BRF1-216ENST00000550208 C16orf87Q6PH81 154 aa18.22■□□□□ 0.51
BRF1-216ENST00000550208 ZNF554Q86TJ5 538 aa18.22■□□□□ 0.51
BRF1-216ENST00000550208 CLVS1Q8IUQ0 354 aaPredicted RBP18.22■□□□□ 0.51
BRF1-216ENST00000550208 SLC25A38Q96DW6 304 aa18.22■□□□□ 0.51
BRF1-216ENST00000550208 C19orf24Q9BVV8 132 aa18.22■□□□□ 0.51
BRF1-216ENST00000550208 CHIAQ9BZP6 476 aa18.22■□□□□ 0.51
BRF1-216ENST00000550208 RAB9BQ9NP90 201 aa18.22■□□□□ 0.51
BRF1-216ENST00000550208 DPM3Q9P2X0 92 aa18.22■□□□□ 0.51
BRF1-216ENST00000550208 ELF5Q9UKW6 265 aaPredicted RBP18.22■□□□□ 0.51
BRF1-216ENST00000550208 SPATA2Q9UM82 520 aa18.22■□□□□ 0.51
BRF1-216ENST00000550208 POMT1Q9Y6A1 747 aa18.22■□□□□ 0.51
BRF1-216ENST00000550208 BUB1B-PAK6H3BSN5 160 aa18.21■□□□□ 0.51
BRF1-216ENST00000550208 CD3GP09693 182 aa18.21■□□□□ 0.51
BRF1-216ENST00000550208 HMGN3Q15651 99 aa18.21■□□□□ 0.51
BRF1-216ENST00000550208 OR52L2PQ8NGH6 319 aa18.21■□□□□ 0.51
BRF1-216ENST00000550208 OR10V1Q8NGI7 309 aa18.21■□□□□ 0.51
BRF1-216ENST00000550208 PIFOQ8TCI5 191 aa18.21■□□□□ 0.51
BRF1-216ENST00000550208 MMP28Q9H239 520 aa18.21■□□□□ 0.51
BRF1-216ENST00000550208 Q9N2K0 584 aa18.21■□□□□ 0.51
BRF1-216ENST00000550208 LEUTXA8MZ59 168 aa18.2■□□□□ 0.5
BRF1-216ENST00000550208 LY6LH3BQJ8 138 aa18.2■□□□□ 0.5
BRF1-216ENST00000550208 H3BUX3 64 aa18.2■□□□□ 0.5
BRF1-216ENST00000550208 RAB13P51153 203 aa18.2■□□□□ 0.5
BRF1-216ENST00000550208 LRRC75BQ2VPJ9 315 aa18.2■□□□□ 0.5
BRF1-216ENST00000550208 C12orf4Q9NQ89 552 aa18.2■□□□□ 0.5
BRF1-216ENST00000550208 OR2S2Q9NQN1 319 aa18.2■□□□□ 0.5
BRF1-216ENST00000550208 GNG12Q9UBI6 72 aa18.2■□□□□ 0.5
BRF1-216ENST00000550208 SCOCQ9UIL1 159 aa18.2■□□□□ 0.5
BRF1-216ENST00000550208 MOB1BQ7L9L4 216 aa18.19■□□□□ 0.5
BRF1-216ENST00000550208 TAF15Q92804 592 aaKnown RBP eCLIP18.19■□□□□ 0.5
BRF1-216ENST00000550208 GALMQ96C23 342 aa18.19■□□□□ 0.5
BRF1-216ENST00000550208 DCSTAMPQ9H295 470 aa18.19■□□□□ 0.5
BRF1-216ENST00000550208 FAM181BA6NEQ2 426 aa18.18■□□□□ 0.5
BRF1-216ENST00000550208 SERPINE3A8MV23 424 aa18.18■□□□□ 0.5
BRF1-216ENST00000550208 SLC31A2O15432 143 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms