RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 OR56B1Q8NGI3 324 aa20.97■□□□□ 0.95
CPSF6-205ENST00000550075 SULT4A1Q9BR01 284 aa20.97■□□□□ 0.95
CPSF6-205ENST00000550075 CHCHD6Q9BRQ6 235 aa20.97■□□□□ 0.95
CPSF6-205ENST00000550075 OR51E2Q9H255 320 aa20.97■□□□□ 0.95
CPSF6-205ENST00000550075 MMP24Q9Y5R2 645 aa20.97■□□□□ 0.95
CPSF6-205ENST00000550075 C12orf77C9JDV5 145 aa20.96■□□□□ 0.95
CPSF6-205ENST00000550075 J3QR06 171 aa20.96■□□□□ 0.95
CPSF6-205ENST00000550075 FAM89BQ8N5H3 189 aa20.96■□□□□ 0.95
CPSF6-205ENST00000550075 RAB22AQ9UL26 194 aa20.96■□□□□ 0.95
CPSF6-205ENST00000550075 PSG11Q9UQ72 335 aa20.96■□□□□ 0.95
CPSF6-205ENST00000550075 TENM1Q9UKZ4 2725 aa20.96■□□□□ 0.95
CPSF6-205ENST00000550075 A0A0A6YYD4 124 aa20.95■□□□□ 0.94
CPSF6-205ENST00000550075 LOC100506127A0A0U1RQW1 187 aa20.95■□□□□ 0.94
CPSF6-205ENST00000550075 POM121CA8CG34 1229 aa20.95■□□□□ 0.94
CPSF6-205ENST00000550075 NOTOA8MTQ0 251 aa20.95■□□□□ 0.94
CPSF6-205ENST00000550075 OOSP1A8MZH6 123 aa20.95■□□□□ 0.94
CPSF6-205ENST00000550075 BUB1B-PAK6H3BSN5 160 aa20.95■□□□□ 0.94
CPSF6-205ENST00000550075 HAX1O00165 279 aa20.95■□□□□ 0.94
CPSF6-205ENST00000550075 BRS3P32247 399 aa20.95■□□□□ 0.94
CPSF6-205ENST00000550075 GNG10P50151 68 aa20.95■□□□□ 0.94
CPSF6-205ENST00000550075 MOB1BQ7L9L4 216 aa20.95■□□□□ 0.94
CPSF6-205ENST00000550075 MRPL30Q8TCC3 161 aaKnown RBP20.95■□□□□ 0.94
CPSF6-205ENST00000550075 FAAP24Q9BTP7 215 aa20.95■□□□□ 0.94
CPSF6-205ENST00000550075 LIN7BQ9HAP6 207 aa20.95■□□□□ 0.94
CPSF6-205ENST00000550075 CHMP1AQ9HD42 196 aaPredicted RBP20.95■□□□□ 0.94
CPSF6-205ENST00000550075 MBNL3Q9NUK0 354 aaKnown RBP20.95■□□□□ 0.94
CPSF6-205ENST00000550075 GFOD1Q9NXC2 390 aa20.95■□□□□ 0.94
CPSF6-205ENST00000550075 HSF4Q9ULV5 492 aa20.95■□□□□ 0.94
CPSF6-205ENST00000550075 TCF19Q9Y242 345 aa20.95■□□□□ 0.94
CPSF6-205ENST00000550075 TMEM272A0A1B0GTI8 110 aa20.94■□□□□ 0.94
CPSF6-205ENST00000550075 LDLRAD4O15165 306 aa20.94■□□□□ 0.94
CPSF6-205ENST00000550075 HBZP02008 142 aa20.94■□□□□ 0.94
CPSF6-205ENST00000550075 MDKP21741 143 aaPredicted RBP20.94■□□□□ 0.94
CPSF6-205ENST00000550075 GADD45AP24522 165 aa20.94■□□□□ 0.94
CPSF6-205ENST00000550075 VEGFCP49767 419 aa20.94■□□□□ 0.94
CPSF6-205ENST00000550075 Q3ZCU0 254 aa20.94■□□□□ 0.94
CPSF6-205ENST00000550075 TPTE2P1Q5T6R2 138 aa20.94■□□□□ 0.94
CPSF6-205ENST00000550075 OR10X1Q8NGY0 326 aa20.94■□□□□ 0.94
CPSF6-205ENST00000550075 LEAP2Q969E1 77 aa20.94■□□□□ 0.94
CPSF6-205ENST00000550075 RPEQ96AT9 228 aa20.94■□□□□ 0.94
CPSF6-205ENST00000550075 RIMS4Q9H426 269 aaPredicted RBP20.94■□□□□ 0.94
CPSF6-205ENST00000550075 GNG12Q9UBI6 72 aa20.94■□□□□ 0.94
CPSF6-205ENST00000550075 SOCS1O15524 211 aa20.93■□□□□ 0.94
CPSF6-205ENST00000550075 RCC1P18754 421 aaPredicted RBP20.93■□□□□ 0.94
CPSF6-205ENST00000550075 RAB6AP20340 208 aa20.93■□□□□ 0.94
CPSF6-205ENST00000550075 MNDAP41218 407 aa20.93■□□□□ 0.94
CPSF6-205ENST00000550075 RELBQ01201 579 aa20.93■□□□□ 0.94
CPSF6-205ENST00000550075 MADCAM1Q13477 382 aa20.93■□□□□ 0.94
CPSF6-205ENST00000550075 PRR18Q8N4B5 295 aa20.93■□□□□ 0.94
CPSF6-205ENST00000550075 DTX3Q8N9I9 347 aa20.93■□□□□ 0.94
CPSF6-205ENST00000550075 UBALD1Q8TB05 177 aa20.93■□□□□ 0.94
CPSF6-205ENST00000550075 TOMM40LQ969M1 308 aa20.93■□□□□ 0.94
CPSF6-205ENST00000550075 TAF9BQ9HBM6 251 aa20.93■□□□□ 0.94
CPSF6-205ENST00000550075 IGHV3-7P01780 117 aa20.92■□□□□ 0.94
CPSF6-205ENST00000550075 C8orf31Q8N9H6 132 aa20.92■□□□□ 0.94
CPSF6-205ENST00000550075 OR4C13Q8NGP0 309 aa20.92■□□□□ 0.94
CPSF6-205ENST00000550075 PIFOQ8TCI5 191 aa20.92■□□□□ 0.94
CPSF6-205ENST00000550075 TAF15Q92804 592 aaKnown RBP eCLIP20.92■□□□□ 0.94
CPSF6-205ENST00000550075 NPFFR1Q9GZQ6 430 aa20.92■□□□□ 0.94
CPSF6-205ENST00000550075 ABRACLQ9P1F3 81 aa20.92■□□□□ 0.94
CPSF6-205ENST00000550075 CLPSL1A2RUU4 121 aa20.91■□□□□ 0.94
CPSF6-205ENST00000550075 SMIM30A4D0T7 59 aa20.91■□□□□ 0.94
CPSF6-205ENST00000550075 METTL21EPA6NDL7 271 aa20.91■□□□□ 0.94
CPSF6-205ENST00000550075 IL3RAP26951 378 aa20.91■□□□□ 0.94
CPSF6-205ENST00000550075 OLFML2AQ68BL7 652 aa20.91■□□□□ 0.94
CPSF6-205ENST00000550075 Q6ZTK2 550 aa20.91■□□□□ 0.94
CPSF6-205ENST00000550075 PTX4Q96A99 478 aa20.91■□□□□ 0.94
CPSF6-205ENST00000550075 ZNF747Q9BV97 191 aa20.91■□□□□ 0.94
CPSF6-205ENST00000550075 RANBP3Q9H6Z4 567 aaPredicted RBP20.91■□□□□ 0.94
CPSF6-205ENST00000550075 MGAT4AQ9UM21 535 aa20.91■□□□□ 0.94
CPSF6-205ENST00000550075 IGHV3-43A0A0B4J1X8 118 aa20.9■□□□□ 0.94
CPSF6-205ENST00000550075 FOXI3A8MTJ6 420 aaPredicted RBP20.9■□□□□ 0.94
CPSF6-205ENST00000550075 LY6LH3BQJ8 138 aa20.9■□□□□ 0.94
CPSF6-205ENST00000550075 NAPSAO96009 420 aa20.9■□□□□ 0.94
CPSF6-205ENST00000550075 IGHV3-43DP0DP04 118 aa20.9■□□□□ 0.94
CPSF6-205ENST00000550075 RAB13P51153 203 aa20.9■□□□□ 0.94
CPSF6-205ENST00000550075 LOXL3P58215 753 aa20.9■□□□□ 0.94
CPSF6-205ENST00000550075 MRPS15P82914 257 aaKnown RBP20.9■□□□□ 0.94
CPSF6-205ENST00000550075 UTF1Q5T230 341 aa20.9■□□□□ 0.94
CPSF6-205ENST00000550075 Q6ZSV7 163 aa20.9■□□□□ 0.94
CPSF6-205ENST00000550075 NR2C2APQ86WQ0 139 aa20.9■□□□□ 0.94
CPSF6-205ENST00000550075 LINC00311Q8N616 119 aa20.9■□□□□ 0.94
CPSF6-205ENST00000550075 OR1L1Q8NH94 360 aa20.9■□□□□ 0.94
CPSF6-205ENST00000550075 ARHGAP5-AS1Q96IT6 56 aa20.9■□□□□ 0.94
CPSF6-205ENST00000550075 C16orf95Q9H693 158 aa20.9■□□□□ 0.94
CPSF6-205ENST00000550075 C12orf4Q9NQ89 552 aa20.9■□□□□ 0.94
CPSF6-205ENST00000550075 A6NDX4 124 aa20.89■□□□□ 0.93
CPSF6-205ENST00000550075 TRIM64CA6NLI5 447 aa20.89■□□□□ 0.93
CPSF6-205ENST00000550075 TSPAN9O75954 239 aa20.89■□□□□ 0.93
CPSF6-205ENST00000550075 JUNBP17275 347 aaPredicted RBP20.89■□□□□ 0.93
CPSF6-205ENST00000550075 SDC2P34741 201 aa20.89■□□□□ 0.93
CPSF6-205ENST00000550075 RAB7AP51149 207 aa20.89■□□□□ 0.93
CPSF6-205ENST00000550075 SFXN4Q6P4A7 337 aa20.89■□□□□ 0.93
CPSF6-205ENST00000550075 SETD6Q8TBK2 473 aa20.89■□□□□ 0.93
CPSF6-205ENST00000550075 GALMQ96C23 342 aa20.89■□□□□ 0.93
CPSF6-205ENST00000550075 RAB3CQ96E17 227 aa20.89■□□□□ 0.93
CPSF6-205ENST00000550075 PECRQ9BY49 303 aa20.89■□□□□ 0.93
CPSF6-205ENST00000550075 AK3Q9UIJ7 227 aa20.89■□□□□ 0.93
CPSF6-205ENST00000550075 DAPK2Q9UIK4 370 aa20.89■□□□□ 0.93
CPSF6-205ENST00000550075 JPT1Q9UK76 154 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms