RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 ISG15P05161 165 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 CD28P10747 220 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 GTF2F2P13984 249 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 MPV17P39210 176 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 CDKN2CP42773 168 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 INPP1P49441 399 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 CEBPGP53567 150 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 AP2S1P53680 142 aaPredicted RBP1.68□□□□□ -2.14
CCDC38-208ENST00000549876 SMAGPQ0VAQ4 97 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 C1DQ13901 141 aaKnown RBP1.68□□□□□ -2.14
CCDC38-208ENST00000549876 BCL2A1Q16548 175 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 SPIN4Q56A73 249 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 SAPCD1Q5SSQ6 148 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 CST9Q5W186 159 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 LPCAT4Q643R3 524 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 TNFAIP8L2Q6P589 184 aaPredicted RBP1.68□□□□□ -2.14
CCDC38-208ENST00000549876 CD200R1LQ6Q8B3 271 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 VN1R4Q7Z5H5 301 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 DPPA2Q7Z7J5 298 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 OR11L1Q8NGX0 322 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 OR5K1Q8NHB7 308 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 HAVCR2Q8TDQ0 301 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 IP6K3Q96PC2 410 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 CCDC94Q9BW85 323 aaPredicted RBP1.68□□□□□ -2.14
CCDC38-208ENST00000549876 CDCA4Q9BXL8 241 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 ULBP1Q9BZM6 244 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 VSIRQ9H7M9 311 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 FAM60AQ9NP50 221 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 TMEM38BQ9NVV0 291 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 EMC3Q9P0I2 261 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 TMEM216Q9P0N5 145 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 A0A1W2PP64 1363 aa1.68□□□□□ -2.14
CCDC38-208ENST00000549876 ARAP3Q8WWN8 1544 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 IGHV1-45A0A0A0MS14 117 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 IZUMO1RA6ND01 250 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 ISLRO14498 428 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 ACOX3O15254 700 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 TGOLN2O43493 480 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 TYMSP04818 313 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 IL4P05112 153 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 OR5AC1P0C628 307 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 LINC00614P0C842 121 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 PTHLHP12272 177 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 CTSEP14091 401 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 ZNF7P17097 686 aaPredicted RBP1.67□□□□□ -2.14
CCDC38-208ENST00000549876 GADD45AP24522 165 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 PSMA1P25786 263 aaKnown RBP1.67□□□□□ -2.14
CCDC38-208ENST00000549876 MIPP30301 263 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 ADORA1P30542 326 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 H2BFSP57053 126 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 RAB2AP61019 212 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 DYNLL1P63167 89 aaKnown RBP1.67□□□□□ -2.14
CCDC38-208ENST00000549876 ZNF616Q08AN1 781 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 IHHQ14623 411 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 TMEM241Q24JQ0 296 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 CENPWQ5EE01 88 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 HENMT1Q5T8I9 393 aaKnown RBP1.67□□□□□ -2.14
CCDC38-208ENST00000549876 SCGB1D4Q6XE38 83 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 FAM19A3Q7Z5A8 133 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 MARCH3Q86UD3 253 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 KRT222Q8N1A0 295 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 MIR7-3HGQ8N6C7 128 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 TMEM105Q8N8V8 129 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 ST20-AS1Q8NBB2 130 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 APCDD1LQ8NCL9 501 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 CCDC112Q8NEF3 446 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 OR5D18Q8NGL1 313 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 OR4C13Q8NGP0 309 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 OR2K2Q8NGT1 345 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 SLC37A2Q8TED4 501 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 TNFAIP8L1Q8WVP5 186 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 CYGBQ8WWM9 190 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 ITLN2Q8WWU7 325 aaPredicted RBP1.67□□□□□ -2.14
CCDC38-208ENST00000549876 RTN4IP1Q8WWV3 396 aaPredicted RBP1.67□□□□□ -2.14
CCDC38-208ENST00000549876 YIPF5Q969M3 257 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 PPP1R14BQ96C90 147 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 C1orf50Q9BV19 199 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 ZNF717Q9BY31 904 aaPredicted RBP1.67□□□□□ -2.14
CCDC38-208ENST00000549876 MROQ9BYG7 248 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 MRPS26Q9BYN8 205 aaKnown RBP1.67□□□□□ -2.14
CCDC38-208ENST00000549876 DERL2Q9GZP9 239 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 OR51B6Q9H340 312 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 LINC00574Q9H8X3 128 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 ZNF586Q9NXT0 402 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 GLS2Q9UI32 602 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 GUCA1BQ9UMX6 200 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 BTRCQ9Y297 605 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 SLC22A7Q9Y694 548 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 S4R3C0 116 aa1.67□□□□□ -2.14
CCDC38-208ENST00000549876 MIA3Q5JRA6 1907 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 IGHV3-43A0A0B4J1X8 118 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 TEX50A0A1B0GTY4 177 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 GOLGA6L4A6NEF3 574 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 SULT1B1O43704 296 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 ARL6IP5O75915 188 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 DCTN3O75935 186 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 ATP5HO75947 161 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 RPP14O95059 124 aaKnown RBP1.66□□□□□ -2.14
CCDC38-208ENST00000549876 CALB1P05937 261 aa1.66□□□□□ -2.14
CCDC38-208ENST00000549876 IDH2P48735 452 aaKnown RBP1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms