RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 ATP23Q9Y6H3 246 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 ITPR3Q14573 2671 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 F8P00451 2351 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 CTXN2P0C2S0 81 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 ZNF44P15621 663 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 AANATQ16613 207 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 Q6P435 159 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 PDZD9Q8IXQ8 264 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 CXorf58Q96LI9 332 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 USB1Q9BQ65 265 aaKnown RBP13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 TMEM100Q9NV29 134 aa13.95□□□□□ -0.18
CHMP1A-204ENST00000547687 TRBV6-6A0A0A6YYG2 114 aa13.94□□□□□ -0.18
CHMP1A-204ENST00000547687 A6NNC1 897 aa13.94□□□□□ -0.18
CHMP1A-204ENST00000547687 H0YL77 283 aa13.94□□□□□ -0.18
CHMP1A-204ENST00000547687 CDIPTO14735 213 aa13.94□□□□□ -0.18
CHMP1A-204ENST00000547687 GRPP07492 148 aa13.94□□□□□ -0.18
CHMP1A-204ENST00000547687 GCH1P30793 250 aa13.94□□□□□ -0.18
CHMP1A-204ENST00000547687 P2RX3P56373 397 aa13.94□□□□□ -0.18
CHMP1A-204ENST00000547687 S100A10P60903 97 aa13.94□□□□□ -0.18
CHMP1A-204ENST00000547687 ERVK11-1P61568 191 aa13.94□□□□□ -0.18
CHMP1A-204ENST00000547687 ZNF154Q13106 437 aa13.94□□□□□ -0.18
CHMP1A-204ENST00000547687 MSMPQ1L6U9 139 aa13.94□□□□□ -0.18
CHMP1A-204ENST00000547687 MBNL2Q5VZF2 373 aaKnown RBP13.94□□□□□ -0.18
CHMP1A-204ENST00000547687 C1orf174Q8IYL3 243 aa13.94□□□□□ -0.18
CHMP1A-204ENST00000547687 OR8G5Q8NG78 346 aa13.94□□□□□ -0.18
CHMP1A-204ENST00000547687 SLC25A32Q9H2D1 315 aa13.94□□□□□ -0.18
CHMP1A-204ENST00000547687 MED9Q9NWA0 146 aa13.94□□□□□ -0.18
CHMP1A-204ENST00000547687 hCG_1807616A0A1W2PRN6 198 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 TMEM210A6NLX4 147 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 ATP6V1G2-DDX39BF2Z307 99 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 I3L521 148 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 TIMM8AO60220 97 aaPredicted RBP13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 KITLGP21583 273 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 HERPUD1Q15011 391 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 TOR2AQ5JU69 321 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 C20orf204Q6ZNR8 217 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 LIAT1Q6ZQX7 453 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 FAM219AQ8IW50 185 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 LRTM2Q8N967 370 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 OR1S1Q8NH92 325 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 PLCE1Q9P212 2302 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 IGHV3-64DA0A0J9YX35 117 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 THBDP07204 575 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 PGA5P0DJD9 388 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 CD40P25942 277 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 GNRHRP30968 328 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 WFDC8Q8IUA0 241 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 FAM185AQ8N0U4 392 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 ZNF565Q8N9K5 539 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 GLYATL2Q8WU03 294 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 FAM222BQ8WU58 562 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 PHYHIPLQ96FC7 376 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 WFIKKN1Q96NZ8 548 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 NRIP2Q9BQI9 281 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 DNAJB11Q9UBS4 358 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 SPEF1Q9Y4P9 236 aa13.93□□□□□ -0.18
CHMP1A-204ENST00000547687 IGKV1-6A0A0C4DH72 117 aa13.92□□□□□ -0.18
CHMP1A-204ENST00000547687 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.92□□□□□ -0.18
CHMP1A-204ENST00000547687 MPPED1O15442 326 aa13.92□□□□□ -0.18
CHMP1A-204ENST00000547687 PHF1O43189 567 aaPredicted RBP13.92□□□□□ -0.18
CHMP1A-204ENST00000547687 MLNRO43193 412 aa13.92□□□□□ -0.18
CHMP1A-204ENST00000547687 NXPH2O95156 264 aa13.92□□□□□ -0.18
CHMP1A-204ENST00000547687 NKX6-1P78426 367 aaPredicted RBP13.92□□□□□ -0.18
CHMP1A-204ENST00000547687 ZNF880Q6PDB4 577 aa13.92□□□□□ -0.18
CHMP1A-204ENST00000547687 FOXRED2Q8IWF2 684 aa13.92□□□□□ -0.18
CHMP1A-204ENST00000547687 LGI3Q8N145 548 aa13.92□□□□□ -0.18
CHMP1A-204ENST00000547687 RBPMSQ93062 196 aaKnown RBP13.92□□□□□ -0.18
CHMP1A-204ENST00000547687 MSI2Q96DH6 328 aaKnown RBP13.92□□□□□ -0.18
CHMP1A-204ENST00000547687 C18orf12Q96KH6 178 aa13.92□□□□□ -0.18
CHMP1A-204ENST00000547687 AQP10Q96PS8 301 aa13.92□□□□□ -0.18
CHMP1A-204ENST00000547687 REG4Q9BYZ8 158 aa13.92□□□□□ -0.18
CHMP1A-204ENST00000547687 PFDN2Q9UHV9 154 aa13.92□□□□□ -0.18
CHMP1A-204ENST00000547687 PRRC2AP48634 2157 aaKnown RBP13.92□□□□□ -0.18
CHMP1A-204ENST00000547687 MSGN1A6NI15 193 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 TUSC2O75896 110 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 OR2H2O95918 312 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 KCNJ3P48549 501 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 PAN3Q58A45 887 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 SPIN3Q5JUX0 258 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 VHLLQ6RSH7 139 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 Q6ZR03 302 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 LYZL2Q7Z4W2 148 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 LRP11Q86VZ4 500 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 ANGPTL6Q8NI99 470 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 SECTM1Q8WVN6 248 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 MSL2Q9HCI7 577 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 SDHAF2Q9NX18 166 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 DUSP13Q9UII6 198 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 C3orf85A0A1B0GTC6 90 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 H7C1Q1 480 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 SIRPB1O00241 398 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 SH2D1BO14796 132 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 RCC1P18754 421 aaPredicted RBP13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 GLRXP35754 106 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 MDH2P40926 338 aaKnown RBP13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 FAM74A1Q5RGS3 127 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 TMEM108Q6UXF1 575 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 OR4A4PQ8NGN8 299 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 SLC5A7Q9GZV3 580 aa13.91□□□□□ -0.18
CHMP1A-204ENST00000547687 PCDHB10Q9UN67 800 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms