RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 SERPINE3A8MV23 424 aa10.52□□□□□ -0.73
CPSF6-204ENST00000547486 K7EIL1 84 aa10.52□□□□□ -0.73
CPSF6-204ENST00000547486 AIPO00170 330 aa10.52□□□□□ -0.73
CPSF6-204ENST00000547486 RPL23AP62750 156 aaKnown RBP10.52□□□□□ -0.73
CPSF6-204ENST00000547486 GPR176Q14439 515 aa10.52□□□□□ -0.73
CPSF6-204ENST00000547486 CT45A1Q5HYN5 189 aa10.52□□□□□ -0.73
CPSF6-204ENST00000547486 SYT6Q5T7P8 510 aaPredicted RBP10.52□□□□□ -0.73
CPSF6-204ENST00000547486 SIGIRRQ6IA17 410 aa10.52□□□□□ -0.73
CPSF6-204ENST00000547486 RAB12Q6IQ22 244 aa10.52□□□□□ -0.73
CPSF6-204ENST00000547486 OR2W3Q7Z3T1 314 aa10.52□□□□□ -0.73
CPSF6-204ENST00000547486 GAPTQ8N292 157 aa10.52□□□□□ -0.73
CPSF6-204ENST00000547486 PACRGLQ8N7B6 248 aa10.52□□□□□ -0.73
CPSF6-204ENST00000547486 Q8N9W7 124 aa10.52□□□□□ -0.73
CPSF6-204ENST00000547486 ZNF439Q8NDP4 499 aa10.52□□□□□ -0.73
CPSF6-204ENST00000547486 OR1L1Q8NH94 360 aa10.52□□□□□ -0.73
CPSF6-204ENST00000547486 CT45A3Q8NHU0 189 aa10.52□□□□□ -0.73
CPSF6-204ENST00000547486 CHPT1Q8WUD6 406 aa10.52□□□□□ -0.73
CPSF6-204ENST00000547486 RTN4IP1Q8WWV3 396 aaPredicted RBP10.52□□□□□ -0.73
CPSF6-204ENST00000547486 RCC1LQ96I51 464 aaKnown RBP10.52□□□□□ -0.73
CPSF6-204ENST00000547486 DERL3Q96Q80 235 aa10.52□□□□□ -0.73
CPSF6-204ENST00000547486 PSORS1C1Q9UIG5 152 aa10.52□□□□□ -0.73
CPSF6-204ENST00000547486 WI2-2373I1.2A0A1W2PRP0 233 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 EFCAB10A6NFE3 127 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 MCRIP1C9JLW8 97 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 RCC1P18754 421 aaPredicted RBP10.51□□□□□ -0.73
CPSF6-204ENST00000547486 CELP19835 753 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 HOXD3P31249 432 aaPredicted RBP10.51□□□□□ -0.73
CPSF6-204ENST00000547486 THBS3P49746 956 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 GP2P55259 537 aaKnown RBP10.51□□□□□ -0.73
CPSF6-204ENST00000547486 MED21Q13503 144 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 INSL4Q14641 139 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 RCN1Q15293 331 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 SLC25A48Q6ZT89 311 aaKnown RBP10.51□□□□□ -0.73
CPSF6-204ENST00000547486 C8orf86Q6ZUL3 223 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 SLC35E3Q7Z769 313 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 TGIF2LXQ8IUE1 241 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 IZUMO1Q8IYV9 350 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 STPG2Q8N412 459 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 STX19Q8N4C7 294 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 OR10V1Q8NGI7 309 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 FBLIM1Q8WUP2 373 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 MRPS24Q96EL2 167 aaKnown RBP10.51□□□□□ -0.73
CPSF6-204ENST00000547486 SELENOIQ9C0D9 397 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 SPACA1Q9HBV2 294 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 PLCXD1Q9NUJ7 323 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 ETAA1Q9NY74 926 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 CNOT2Q9NZN8 540 aaKnown RBP10.51□□□□□ -0.73
CPSF6-204ENST00000547486 TRAPPC2LQ9UL33 140 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 PEX16Q9Y5Y5 336 aa10.51□□□□□ -0.73
CPSF6-204ENST00000547486 SC5DO75845 299 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 HBZP02008 142 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 CD1AP06126 327 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 MGMTP16455 207 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 CD1BP29016 333 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 CAPGP40121 348 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 GPR12P47775 334 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 F2RL1P55085 397 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 EGFEM1PQ0D2K5 195 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 AWAT2Q6E213 333 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 AHSA2Q719I0 299 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 CDH26Q8IXH8 852 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 PRR18Q8N4B5 295 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 NANOGP1Q8N7R0 232 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 BPIFB6Q8NFQ5 453 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 OR2T10Q8NGZ9 312 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 DUX3Q96PT4 197 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 ABCG5Q9H222 651 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 C8orf4Q9NR00 106 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 ZFP57Q9NU63 452 aa10.5□□□□□ -0.73
CPSF6-204ENST00000547486 UBE2QL1A1L167 161 aa10.49□□□□□ -0.73
CPSF6-204ENST00000547486 SPINT2O43291 252 aa10.49□□□□□ -0.73
CPSF6-204ENST00000547486 CRTAPO75718 401 aaPredicted RBP10.49□□□□□ -0.73
CPSF6-204ENST00000547486 DUS4LO95620 317 aaKnown RBP10.49□□□□□ -0.73
CPSF6-204ENST00000547486 MOSP00540 346 aa10.49□□□□□ -0.73
CPSF6-204ENST00000547486 FUT3P21217 361 aa10.49□□□□□ -0.73
CPSF6-204ENST00000547486 ZNF137PP52743 207 aa10.49□□□□□ -0.73
CPSF6-204ENST00000547486 WNT4P56705 351 aa10.49□□□□□ -0.73
CPSF6-204ENST00000547486 TAS2R43P59537 309 aa10.49□□□□□ -0.73
CPSF6-204ENST00000547486 OGFRL1Q5TC84 451 aaPredicted RBP10.49□□□□□ -0.73
CPSF6-204ENST00000547486 LCNL1Q6ZST4 164 aa10.49□□□□□ -0.73
CPSF6-204ENST00000547486 FOXRED2Q8IWF2 684 aa10.49□□□□□ -0.73
CPSF6-204ENST00000547486 C8orf59Q8N0T1 100 aaPredicted RBP10.49□□□□□ -0.73
CPSF6-204ENST00000547486 Q96M66 194 aa10.49□□□□□ -0.73
CPSF6-204ENST00000547486 S1PR3Q99500 378 aa10.49□□□□□ -0.73
CPSF6-204ENST00000547486 P2RX4Q99571 388 aa10.49□□□□□ -0.73
CPSF6-204ENST00000547486 TAF9BQ9HBM6 251 aa10.49□□□□□ -0.73
CPSF6-204ENST00000547486 LIN7CQ9NUP9 197 aaKnown RBP10.49□□□□□ -0.73
CPSF6-204ENST00000547486 FKBP14Q9NWM8 211 aa10.49□□□□□ -0.73
CPSF6-204ENST00000547486 GNG12Q9UBI6 72 aa10.49□□□□□ -0.73
CPSF6-204ENST00000547486 FAM90A10PA6NDY2 464 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 FAM90A7PA6NKC0 464 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 NUDT19A8MXV4 375 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 FAM90A23PA8MXZ1 464 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 AP4M1O00189 453 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 RPLP1P05386 114 aaKnown RBP10.48□□□□□ -0.73
CPSF6-204ENST00000547486 MYCNOSP40205 109 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 SLC35B1P78383 322 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 PNLIPRP3Q17RR3 467 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 Q3ZCU0 254 aa10.48□□□□□ -0.73
CPSF6-204ENST00000547486 MORN2Q502X0 79 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms