RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 GFOD1Q9NXC2 390 aa12.76□□□□□ -0.37
DDX54-204ENST00000546898 TRAPPC2LQ9UL33 140 aa12.76□□□□□ -0.37
DDX54-204ENST00000546898 C12orf77C9JDV5 145 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 M0QZ24 198 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 SDCBPO00560 298 aaPredicted RBP12.75□□□□□ -0.37
DDX54-204ENST00000546898 SPINT2O43291 252 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 CHATP28329 748 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 GNG10P50151 68 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 RAB7AP51149 207 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 PSMD7P51665 324 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 QRFPP83859 136 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 UNC119Q13432 240 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 SSX1Q16384 188 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 OR10K2Q6IF99 312 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 OR2W3Q7Z3T1 314 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 LINC00311Q8N616 119 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 OR10X1Q8NGY0 326 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 OR4K15Q8NH41 348 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 LEAP2Q969E1 77 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 GFI1Q99684 422 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 SIGLEC9Q9Y336 463 aa12.75□□□□□ -0.37
DDX54-204ENST00000546898 RRP15Q9Y3B9 282 aaKnown RBP12.75□□□□□ -0.37
DDX54-204ENST00000546898 AK6Q9Y3D8 172 aaKnown RBP12.75□□□□□ -0.37
DDX54-204ENST00000546898 UBE2QL1A1L167 161 aa12.74□□□□□ -0.37
DDX54-204ENST00000546898 OR2F2O95006 317 aa12.74□□□□□ -0.37
DDX54-204ENST00000546898 IGHV3-7P01780 117 aa12.74□□□□□ -0.37
DDX54-204ENST00000546898 ARSBP15848 533 aa12.74□□□□□ -0.37
DDX54-204ENST00000546898 GALP22466 123 aa12.74□□□□□ -0.37
DDX54-204ENST00000546898 LOXL3P58215 753 aa12.74□□□□□ -0.37
DDX54-204ENST00000546898 HERPUD1Q15011 391 aa12.74□□□□□ -0.37
DDX54-204ENST00000546898 RAB11BQ15907 218 aa12.74□□□□□ -0.37
DDX54-204ENST00000546898 NKAPLQ5M9Q1 402 aa12.74□□□□□ -0.37
DDX54-204ENST00000546898 UBE2UQ5VVX9 321 aa12.74□□□□□ -0.37
DDX54-204ENST00000546898 CD200R1LQ6Q8B3 271 aa12.74□□□□□ -0.37
DDX54-204ENST00000546898 Q6ZTK2 550 aa12.74□□□□□ -0.37
DDX54-204ENST00000546898 OR8H3Q8N146 312 aa12.74□□□□□ -0.37
DDX54-204ENST00000546898 KLHDC1Q8N7A1 406 aa12.74□□□□□ -0.37
DDX54-204ENST00000546898 CAPSLQ8WWF8 208 aa12.74□□□□□ -0.37
DDX54-204ENST00000546898 FCGR1BQ92637 280 aa12.74□□□□□ -0.37
DDX54-204ENST00000546898 URM1Q9BTM9 101 aaKnown RBP12.74□□□□□ -0.37
DDX54-204ENST00000546898 MBNL3Q9NUK0 354 aaKnown RBP12.74□□□□□ -0.37
DDX54-204ENST00000546898 LRRC42Q9Y546 428 aa12.74□□□□□ -0.37
DDX54-204ENST00000546898 TRDV1A0A1B0GX56 115 aa12.73□□□□□ -0.37
DDX54-204ENST00000546898 A0A1W2PPI3 338 aa12.73□□□□□ -0.37
DDX54-204ENST00000546898 CCRL2O00421 344 aa12.73□□□□□ -0.37
DDX54-204ENST00000546898 PDCD5O14737 125 aa12.73□□□□□ -0.37
DDX54-204ENST00000546898 HBZP02008 142 aa12.73□□□□□ -0.37
DDX54-204ENST00000546898 IL3RAP26951 378 aa12.73□□□□□ -0.37
DDX54-204ENST00000546898 ZNF816Q0VGE8 651 aaPredicted RBP12.73□□□□□ -0.37
DDX54-204ENST00000546898 TREML4Q6UXN2 200 aa12.73□□□□□ -0.37
DDX54-204ENST00000546898 THNSL2Q86YJ6 484 aa12.73□□□□□ -0.37
DDX54-204ENST00000546898 SPARTQ8N0X7 666 aa12.73□□□□□ -0.37
DDX54-204ENST00000546898 MRPL30Q8TCC3 161 aaKnown RBP12.73□□□□□ -0.37
DDX54-204ENST00000546898 RBM14Q96PK6 669 aaKnown RBP12.73□□□□□ -0.37
DDX54-204ENST00000546898 SULT4A1Q9BR01 284 aa12.73□□□□□ -0.37
DDX54-204ENST00000546898 OCSTAMPQ9BR26 566 aa12.73□□□□□ -0.37
DDX54-204ENST00000546898 NICN1Q9BSH3 213 aa12.73□□□□□ -0.37
DDX54-204ENST00000546898 SLC25A33Q9BSK2 321 aa12.73□□□□□ -0.37
DDX54-204ENST00000546898 KCNK15Q9H427 330 aa12.73□□□□□ -0.37
DDX54-204ENST00000546898 KCNIP1Q9NZI2 227 aa12.73□□□□□ -0.37
DDX54-204ENST00000546898 V9GY05 133 aa12.73□□□□□ -0.37
DDX54-204ENST00000546898 IGHV3-43A0A0B4J1X8 118 aa12.72□□□□□ -0.37
DDX54-204ENST00000546898 TRAV1-2A0A0B4J238 106 aa12.72□□□□□ -0.37
DDX54-204ENST00000546898 FAM90A9PA6NNJ1 464 aa12.72□□□□□ -0.37
DDX54-204ENST00000546898 HSD17B6O14756 317 aa12.72□□□□□ -0.37
DDX54-204ENST00000546898 FAM106CPP0CH98 169 aa12.72□□□□□ -0.37
DDX54-204ENST00000546898 IGHV3-43DP0DP04 118 aa12.72□□□□□ -0.37
DDX54-204ENST00000546898 RCC1P18754 421 aaPredicted RBP12.72□□□□□ -0.37
DDX54-204ENST00000546898 MYL9P24844 172 aa12.72□□□□□ -0.37
DDX54-204ENST00000546898 CD24P25063 80 aa12.72□□□□□ -0.37
DDX54-204ENST00000546898 P2RY14Q15391 338 aa12.72□□□□□ -0.37
DDX54-204ENST00000546898 ARSJQ5FYB0 599 aaPredicted RBP12.72□□□□□ -0.37
DDX54-204ENST00000546898 UBALD1Q8TB05 177 aa12.72□□□□□ -0.37
DDX54-204ENST00000546898 CFHR4Q92496 578 aa12.72□□□□□ -0.37
DDX54-204ENST00000546898 LPAR5Q9H1C0 372 aa12.72□□□□□ -0.37
DDX54-204ENST00000546898 TAF9BQ9HBM6 251 aa12.72□□□□□ -0.37
DDX54-204ENST00000546898 SERTAD4Q9NUC0 356 aa12.72□□□□□ -0.37
DDX54-204ENST00000546898 GNG12Q9UBI6 72 aa12.72□□□□□ -0.37
DDX54-204ENST00000546898 A0A1W2PPE3 182 aa12.71□□□□□ -0.37
DDX54-204ENST00000546898 M0QZK8 103 aa12.71□□□□□ -0.37
DDX54-204ENST00000546898 GAPDHP04406 335 aaKnown RBP12.71□□□□□ -0.37
DDX54-204ENST00000546898 BLVRBP30043 206 aaPredicted RBP12.71□□□□□ -0.37
DDX54-204ENST00000546898 BLCAPP62952 87 aa12.71□□□□□ -0.37
DDX54-204ENST00000546898 HABP2Q14520 560 aaPredicted RBP12.71□□□□□ -0.37
DDX54-204ENST00000546898 C2orf68Q2NKX9 166 aa12.71□□□□□ -0.37
DDX54-204ENST00000546898 SLC25A48Q6ZT89 311 aaKnown RBP12.71□□□□□ -0.37
DDX54-204ENST00000546898 C6orf201Q7Z4U5 140 aa12.71□□□□□ -0.37
DDX54-204ENST00000546898 PRR18Q8N4B5 295 aa12.71□□□□□ -0.37
DDX54-204ENST00000546898 FAM89BQ8N5H3 189 aa12.71□□□□□ -0.37
DDX54-204ENST00000546898 OR56B4Q8NH76 319 aa12.71□□□□□ -0.37
DDX54-204ENST00000546898 OR1L1Q8NH94 360 aa12.71□□□□□ -0.37
DDX54-204ENST00000546898 PLEKHJ1Q9NW61 149 aa12.71□□□□□ -0.37
DDX54-204ENST00000546898 STEAP1Q9UHE8 339 aa12.71□□□□□ -0.37
DDX54-204ENST00000546898 JPT1Q9UK76 154 aa12.71□□□□□ -0.37
DDX54-204ENST00000546898 A0A0A6YYD4 124 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 TXNL1O43396 289 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 PEX14O75381 377 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 LPLP06858 475 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 SNRNP70P08621 437 aaKnown RBP12.7□□□□□ -0.38
DDX54-204ENST00000546898 VSIG10L2P0DP72 767 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms