RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 F2RL2O00254 374 aa16.9■□□□□ 0.3
SCARB1-211ENST00000546215 HBZP02008 142 aa16.9■□□□□ 0.3
SCARB1-211ENST00000546215 NFYBP25208 207 aa16.9■□□□□ 0.3
SCARB1-211ENST00000546215 LTC4SQ16873 150 aa16.9■□□□□ 0.3
SCARB1-211ENST00000546215 DEFB112Q30KQ8 113 aa16.9■□□□□ 0.3
SCARB1-211ENST00000546215 ABHD12Q8N2K0 398 aa16.9■□□□□ 0.3
SCARB1-211ENST00000546215 OR1L1Q8NH94 360 aa16.9■□□□□ 0.3
SCARB1-211ENST00000546215 AP3S1Q92572 193 aa16.9■□□□□ 0.3
SCARB1-211ENST00000546215 PHF21AQ96BD5 680 aa16.9■□□□□ 0.3
SCARB1-211ENST00000546215 AJUBAQ96IF1 538 aa16.9■□□□□ 0.3
SCARB1-211ENST00000546215 ZNF286AQ9HBT8 521 aa16.9■□□□□ 0.3
SCARB1-211ENST00000546215 KCNIP1Q9NZI2 227 aa16.9■□□□□ 0.3
SCARB1-211ENST00000546215 CCDC160A6NGH7 325 aa16.89■□□□□ 0.3
SCARB1-211ENST00000546215 SPINT2O43291 252 aa16.89■□□□□ 0.3
SCARB1-211ENST00000546215 IFNA2P01563 188 aa16.89■□□□□ 0.3
SCARB1-211ENST00000546215 ARG1P05089 322 aa16.89■□□□□ 0.3
SCARB1-211ENST00000546215 GSTP1P09211 210 aaKnown RBP16.89■□□□□ 0.3
SCARB1-211ENST00000546215 CD3GP09693 182 aa16.89■□□□□ 0.3
SCARB1-211ENST00000546215 SOX6P35712 828 aa16.89■□□□□ 0.3
SCARB1-211ENST00000546215 LOXL3P58215 753 aa16.89■□□□□ 0.3
SCARB1-211ENST00000546215 HMGN3Q15651 99 aa16.89■□□□□ 0.3
SCARB1-211ENST00000546215 MOB1BQ7L9L4 216 aa16.89■□□□□ 0.3
SCARB1-211ENST00000546215 PRR18Q8N4B5 295 aa16.89■□□□□ 0.3
SCARB1-211ENST00000546215 SIGLECL1Q8N7X8 197 aa16.89■□□□□ 0.3
SCARB1-211ENST00000546215 OR52M1Q8NGK5 317 aa16.89■□□□□ 0.3
SCARB1-211ENST00000546215 S100A16Q96FQ6 103 aaKnown RBP16.89■□□□□ 0.3
SCARB1-211ENST00000546215 CMTM3Q96MX0 182 aa16.89■□□□□ 0.3
SCARB1-211ENST00000546215 PRDM13Q9H4Q3 707 aa16.89■□□□□ 0.3
SCARB1-211ENST00000546215 Q9N2K0 584 aa16.89■□□□□ 0.3
SCARB1-211ENST00000546215 RAB9BQ9NP90 201 aa16.89■□□□□ 0.3
SCARB1-211ENST00000546215 DIABLOQ9NR28 239 aa16.89■□□□□ 0.3
SCARB1-211ENST00000546215 MDFIC2A0A1B0GVS7 189 aa16.89■□□□□ 0.29
SCARB1-211ENST00000546215 HACD4Q5VWC8 232 aa16.89■□□□□ 0.29
SCARB1-211ENST00000546215 SETD6Q8TBK2 473 aa16.89■□□□□ 0.29
SCARB1-211ENST00000546215 C17orf50Q8WW18 174 aa16.89■□□□□ 0.29
SCARB1-211ENST00000546215 CCDC59Q9P031 241 aaKnown RBP16.89■□□□□ 0.29
SCARB1-211ENST00000546215 RSL24D1Q9UHA3 163 aaKnown RBP16.89■□□□□ 0.29
SCARB1-211ENST00000546215 TRAV18A0A075B6X5 111 aa16.88■□□□□ 0.29
SCARB1-211ENST00000546215 TMEM235A6NFC5 223 aa16.88■□□□□ 0.29
SCARB1-211ENST00000546215 ZNF701M0R085 212 aaPredicted RBP16.88■□□□□ 0.29
SCARB1-211ENST00000546215 SDCBPO00560 298 aaPredicted RBP16.88■□□□□ 0.29
SCARB1-211ENST00000546215 XRCC3O43542 346 aa16.88■□□□□ 0.29
SCARB1-211ENST00000546215 IGLV1-47P01700 117 aa16.88■□□□□ 0.29
SCARB1-211ENST00000546215 APOA1P02647 267 aa16.88■□□□□ 0.29
SCARB1-211ENST00000546215 EIF4EP06730 217 aaKnown RBP16.88■□□□□ 0.29
SCARB1-211ENST00000546215 MRPS15P82914 257 aaKnown RBP16.88■□□□□ 0.29
SCARB1-211ENST00000546215 ARFRP1Q13795 201 aa16.88■□□□□ 0.29
SCARB1-211ENST00000546215 LDLRAD2Q5SZI1 272 aa16.88■□□□□ 0.29
SCARB1-211ENST00000546215 FAM53AQ6NSI3 398 aaPredicted RBP16.88■□□□□ 0.29
SCARB1-211ENST00000546215 MZT2AQ6P582 158 aa16.88■□□□□ 0.29
SCARB1-211ENST00000546215 ZNF418Q8TF45 676 aaPredicted RBP16.88■□□□□ 0.29
SCARB1-211ENST00000546215 LEAP2Q969E1 77 aa16.88■□□□□ 0.29
SCARB1-211ENST00000546215 GFOD1Q9NXC2 390 aa16.88■□□□□ 0.29
SCARB1-211ENST00000546215 HPGDSO60760 199 aa16.87■□□□□ 0.29
SCARB1-211ENST00000546215 IGHV3-7P01780 117 aa16.87■□□□□ 0.29
SCARB1-211ENST00000546215 FCGR3AP08637 254 aa16.87■□□□□ 0.29
SCARB1-211ENST00000546215 LGALS4P56470 323 aa16.87■□□□□ 0.29
SCARB1-211ENST00000546215 RIPPLY3P57055 190 aa16.87■□□□□ 0.29
SCARB1-211ENST00000546215 TMEM30BQ3MIR4 351 aa16.87■□□□□ 0.29
SCARB1-211ENST00000546215 LHFPL4Q7Z7J7 247 aa16.87■□□□□ 0.29
SCARB1-211ENST00000546215 OR4P4Q8NGL7 312 aa16.87■□□□□ 0.29
SCARB1-211ENST00000546215 MGAT4AQ9UM21 535 aa16.87■□□□□ 0.29
SCARB1-211ENST00000546215 PSG11Q9UQ72 335 aa16.87■□□□□ 0.29
SCARB1-211ENST00000546215 FAM96BQ9Y3D0 163 aa16.87■□□□□ 0.29
SCARB1-211ENST00000546215 IGHV3-43A0A0B4J1X8 118 aa16.86■□□□□ 0.29
SCARB1-211ENST00000546215 MELTFP08582 738 aa16.86■□□□□ 0.29
SCARB1-211ENST00000546215 IGHV3-43DP0DP04 118 aa16.86■□□□□ 0.29
SCARB1-211ENST00000546215 HTD2P86397 168 aa16.86■□□□□ 0.29
SCARB1-211ENST00000546215 PNLIPRP3Q17RR3 467 aa16.86■□□□□ 0.29
SCARB1-211ENST00000546215 IZUMO1Q8IYV9 350 aa16.86■□□□□ 0.29
SCARB1-211ENST00000546215 DTX3Q8N9I9 347 aa16.86■□□□□ 0.29
SCARB1-211ENST00000546215 BEND2Q8NDZ0 799 aa16.86■□□□□ 0.29
SCARB1-211ENST00000546215 OR9G1Q8NH87 305 aa16.86■□□□□ 0.29
SCARB1-211ENST00000546215 ZNF596Q8TC21 504 aa16.86■□□□□ 0.29
SCARB1-211ENST00000546215 GALMQ96C23 342 aa16.86■□□□□ 0.29
SCARB1-211ENST00000546215 ZNF230Q9UIE0 474 aaPredicted RBP16.86■□□□□ 0.29
SCARB1-211ENST00000546215 TBL2Q9Y4P3 447 aaKnown RBP16.86■□□□□ 0.29
SCARB1-211ENST00000546215 A0A0A6YYJ9 748 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 SMIM31A0A1B0GVY4 71 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 J3QR06 171 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 TCF21O43680 179 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 FBP1P09467 338 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 ELK1P19419 428 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 HILS1P60008 231 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 HLA-DRB3P79483 266 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 NUDCD2Q8WVJ2 157 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 SLIRPQ9GZT3 109 aaKnown RBP16.85■□□□□ 0.29
SCARB1-211ENST00000546215 AUNIPQ9H7T9 357 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 OR2S2Q9NQN1 319 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 ZNRD1Q9P1U0 126 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 DPPA5A6NC42 116 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 TOR1AO14656 332 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 SCTP09683 121 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 DTYMKP23919 212 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 TALDO1P37837 337 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 PRRX1P54821 245 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 PITPNAQ00169 270 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 SRSF7Q16629 238 aaKnown RBP eCLIP16.85■□□□□ 0.293e-6■■■■□ 20.4
SCARB1-211ENST00000546215 HLA-DRB5Q30154 266 aa16.85■□□□□ 0.29
SCARB1-211ENST00000546215 MINOS1Q5TGZ0 78 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms