RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 SPINT2O43291 252 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 TCF21O43680 179 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 NOL3O60936 208 aaKnown RBP16.64■□□□□ 0.25
HMGA2-211ENST00000545998 HBZP02008 142 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 ARG1P05089 322 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 ARL6IP1Q15041 203 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 LTC4SQ16873 150 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 UBE2NLQ5JXB2 153 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 OR1L1Q8NH94 360 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 C17orf50Q8WW18 174 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 KCNIP1Q9NZI2 227 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 A0A0A6YYH2 397 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 A6NJ64 397 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 ZNF182P17025 639 aaPredicted RBP16.64■□□□□ 0.25
HMGA2-211ENST00000545998 CDNFQ49AH0 187 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 MOB1BQ7L9L4 216 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 C5orf24Q7Z6I8 188 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 SAMD12Q8N8I0 201 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 OR52M1Q8NGK5 317 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 ACOT12Q8WYK0 555 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 RBM38Q9H0Z9 239 aaKnown RBP16.64■□□□□ 0.25
HMGA2-211ENST00000545998 RAB9BQ9NP90 201 aa16.64■□□□□ 0.25
HMGA2-211ENST00000545998 ELF5Q9UKW6 265 aaPredicted RBP16.64■□□□□ 0.25
HMGA2-211ENST00000545998 A0A0A6YYJ9 748 aa16.63■□□□□ 0.25
HMGA2-211ENST00000545998 CD3GP09693 182 aa16.63■□□□□ 0.25
HMGA2-211ENST00000545998 LGALS4P56470 323 aa16.63■□□□□ 0.25
HMGA2-211ENST00000545998 LOXL3P58215 753 aa16.63■□□□□ 0.25
HMGA2-211ENST00000545998 HILS1P60008 231 aa16.63■□□□□ 0.25
HMGA2-211ENST00000545998 HMGN3Q15651 99 aa16.63■□□□□ 0.25
HMGA2-211ENST00000545998 ZNF260Q3ZCT1 412 aa16.63■□□□□ 0.25
HMGA2-211ENST00000545998 LDLRAD2Q5SZI1 272 aa16.63■□□□□ 0.25
HMGA2-211ENST00000545998 PRR18Q8N4B5 295 aa16.63■□□□□ 0.25
HMGA2-211ENST00000545998 SETD6Q8TBK2 473 aa16.63■□□□□ 0.25
HMGA2-211ENST00000545998 LEAP2Q969E1 77 aa16.63■□□□□ 0.25
HMGA2-211ENST00000545998 PHF21AQ96BD5 680 aa16.63■□□□□ 0.25
HMGA2-211ENST00000545998 COMMD3Q9UBI1 195 aa16.63■□□□□ 0.25
HMGA2-211ENST00000545998 FAM96BQ9Y3D0 163 aa16.63■□□□□ 0.25
HMGA2-211ENST00000545998 TBL2Q9Y4P3 447 aaKnown RBP16.63■□□□□ 0.25
HMGA2-211ENST00000545998 SDCBPO00560 298 aaPredicted RBP16.62■□□□□ 0.25
HMGA2-211ENST00000545998 IGLV1-47P01700 117 aa16.62■□□□□ 0.25
HMGA2-211ENST00000545998 GSTP1P09211 210 aaKnown RBP16.62■□□□□ 0.25
HMGA2-211ENST00000545998 TMEM30BQ3MIR4 351 aa16.62■□□□□ 0.25
HMGA2-211ENST00000545998 RBMS3Q6XE24 437 aaKnown RBP16.62■□□□□ 0.25
HMGA2-211ENST00000545998 LHFPL4Q7Z7J7 247 aa16.62■□□□□ 0.25
HMGA2-211ENST00000545998 OR4P4Q8NGL7 312 aa16.62■□□□□ 0.25
HMGA2-211ENST00000545998 DYNC2LI1Q8TCX1 351 aa16.62■□□□□ 0.25
HMGA2-211ENST00000545998 AP3S1Q92572 193 aa16.62■□□□□ 0.25
HMGA2-211ENST00000545998 Q9N2K0 584 aa16.62■□□□□ 0.25
HMGA2-211ENST00000545998 ESM1Q9NQ30 184 aa16.62■□□□□ 0.25
HMGA2-211ENST00000545998 GFOD1Q9NXC2 390 aa16.62■□□□□ 0.25
HMGA2-211ENST00000545998 VENTXO95231 258 aa16.61■□□□□ 0.25
HMGA2-211ENST00000545998 FBP1P09467 338 aa16.61■□□□□ 0.25
HMGA2-211ENST00000545998 MRPS15P82914 257 aaKnown RBP16.61■□□□□ 0.25
HMGA2-211ENST00000545998 HACD4Q5VWC8 232 aa16.61■□□□□ 0.25
HMGA2-211ENST00000545998 Q6YL49 198 aa16.61■□□□□ 0.25
HMGA2-211ENST00000545998 BEND2Q8NDZ0 799 aa16.61■□□□□ 0.25
HMGA2-211ENST00000545998 OR9G1Q8NH87 305 aa16.61■□□□□ 0.25
HMGA2-211ENST00000545998 ZNF596Q8TC21 504 aa16.61■□□□□ 0.25
HMGA2-211ENST00000545998 ZDHHC16Q969W1 377 aa16.61■□□□□ 0.25
HMGA2-211ENST00000545998 S100A16Q96FQ6 103 aaKnown RBP16.61■□□□□ 0.25
HMGA2-211ENST00000545998 CMTM3Q96MX0 182 aa16.61■□□□□ 0.25
HMGA2-211ENST00000545998 DIABLOQ9NR28 239 aa16.61■□□□□ 0.25
HMGA2-211ENST00000545998 MGAT4AQ9UM21 535 aa16.61■□□□□ 0.25
HMGA2-211ENST00000545998 PSG11Q9UQ72 335 aa16.61■□□□□ 0.25
HMGA2-211ENST00000545998 TRAV18A0A075B6X5 111 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 IGHV3-43A0A0B4J1X8 118 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 TMEM235A6NFC5 223 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 IGHV3-7P01780 117 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 FCGR3AP08637 254 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 IGHV3-43DP0DP04 118 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 SOX6P35712 828 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 HTD2P86397 168 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 ARFRP1Q13795 201 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 MINOS1Q5TGZ0 78 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 FAM53AQ6NSI3 398 aaPredicted RBP16.6■□□□□ 0.25
HMGA2-211ENST00000545998 LDLRAD3Q86YD5 345 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 ZNRD1Q9P1U0 126 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 MINOS1-NBL1R4GNA1 71 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 J3QR06 171 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 TOR1AO14656 332 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 XRCC3O43542 346 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 EIF4EP06730 217 aaKnown RBP16.6■□□□□ 0.25
HMGA2-211ENST00000545998 MELTFP08582 738 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 PRRX1P54821 245 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 HLA-DRB3P79483 266 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 BAMBIQ13145 260 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 PNLIPRP3Q17RR3 467 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 HLA-DRB5Q30154 266 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 MZT2AQ6P582 158 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 ZDHHC22Q8N966 263 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 GALMQ96C23 342 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 JMJD8Q96S16 334 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 MEGF9Q9H1U4 602 aa16.6■□□□□ 0.25
HMGA2-211ENST00000545998 CCDC59Q9P031 241 aaKnown RBP16.6■□□□□ 0.25
HMGA2-211ENST00000545998 CCDC160A6NGH7 325 aa16.59■□□□□ 0.25
HMGA2-211ENST00000545998 APOA1P02647 267 aa16.59■□□□□ 0.25
HMGA2-211ENST00000545998 SRSF2Q01130 221 aaKnown RBP16.59■□□□□ 0.25
HMGA2-211ENST00000545998 DYNAPQ8N1N2 210 aa16.59■□□□□ 0.25
HMGA2-211ENST00000545998 MALSU1Q96EH3 234 aa16.59■□□□□ 0.25
HMGA2-211ENST00000545998 MMP28Q9H239 520 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms