RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 MLNP12872 115 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 ZNF708P17019 499 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 PRKACAP17612 351 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 SRMP19623 302 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 TUBG1P23258 451 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 IMPA1P29218 277 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 CCT6AP40227 531 aaKnown RBP0.93□□□□□ -2.26
YBX3-214ENST00000544501 PEX19P40855 299 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 RPL31P62899 125 aaKnown RBP0.93□□□□□ -2.26
YBX3-214ENST00000544501 DOC2AQ14183 400 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 SSX1Q16384 188 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 LGALSLQ3ZCW2 172 aaPredicted RBP0.93□□□□□ -2.26
YBX3-214ENST00000544501 ZNF404Q494X3 552 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 SYT6Q5T7P8 510 aaPredicted RBP0.93□□□□□ -2.26
YBX3-214ENST00000544501 PRNTQ86SH4 94 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 LINC00523Q86TU6 105 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 CA13Q8N1Q1 262 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 CCNYL1Q8N7R7 359 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 FBXO36Q8NEA4 188 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 OR8S1Q8NH09 359 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 MUC7Q8TAX7 377 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 TFGQ92734 400 aaPredicted RBP0.93□□□□□ -2.26
YBX3-214ENST00000544501 TNFRSF14Q92956 283 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 YPEL4Q96NS1 127 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 METTL26Q96S19 204 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 C20orf144Q9BQM9 153 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 HIGD2AQ9BW72 106 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 SRRQ9GZT4 340 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 OR2AG1Q9H205 316 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 ASB7Q9H672 318 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 RHOFQ9HBH0 211 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 TUBG2Q9NRH3 451 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 IFNKQ9P0W0 207 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 RAB23Q9ULC3 237 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 AP3M1Q9Y2T2 418 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 SAMHD1Q9Y3Z3 626 aaKnown RBP0.93□□□□□ -2.26
YBX3-214ENST00000544501 DCHS2Q6V1P9 2916 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 LOXHD1Q8IVV2 1947 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 CCNB3Q8WWL7 1395 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 SDK2Q58EX2 2172 aa0.93□□□□□ -2.26
YBX3-214ENST00000544501 CACNA1SQ13698 1873 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 NSD1Q96L73 2696 aaPredicted RBP0.92□□□□□ -2.26
YBX3-214ENST00000544501 PRRC2CQ9Y520 2896 aaKnown RBP0.92□□□□□ -2.26
YBX3-214ENST00000544501 MAP2P11137 1827 aaKnown RBP0.92□□□□□ -2.26
YBX3-214ENST00000544501 ITGB4P16144 1822 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 AFDNP55196 1824 aaKnown RBP0.92□□□□□ -2.26
YBX3-214ENST00000544501 CPSF1Q10570 1443 aaKnown RBP0.92□□□□□ -2.26
YBX3-214ENST00000544501 RIC1Q4ADV7 1423 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 MYO9BQ13459 2157 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 IGHV3-43A0A0B4J1X8 118 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 A0A1B0GU33 70 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 LOC389332A0A1B0GUA5 103 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 GOLGA6L7A0A1B0GV03 622 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 CD300LBA8K4G0 201 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 SEC14L6B5MCN3 397 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 C3orf84H3BNL1 204 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 M0R1B8 84 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 ZNF593O00488 134 aaPredicted RBP0.92□□□□□ -2.26
YBX3-214ENST00000544501 RNF113AO15541 343 aaKnown RBP0.92□□□□□ -2.26
YBX3-214ENST00000544501 COX7A2P2O60397 106 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 ALOX12BO75342 701 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 SNAI1O95863 264 aaPredicted RBP0.92□□□□□ -2.26
YBX3-214ENST00000544501 HLA-AP01891 365 aaKnown RBP0.92□□□□□ -2.26
YBX3-214ENST00000544501 RHOCP08134 193 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 CCL5P13501 91 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 HOXB8P17481 243 aaPredicted RBP0.92□□□□□ -2.26
YBX3-214ENST00000544501 TAC1P20366 129 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 P2RY2P41231 377 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 LGALS7P47929 136 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 BCAP31P51572 246 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 TPBGQ13641 420 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 TTMPQ5BVD1 217 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 TMEM215Q68D42 235 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 DUPD1Q68J44 220 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 UGT2A3Q6UWM9 527 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 LINC00596Q86U02 117 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 NELFCDQ8IXH7 590 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 Q8NDZ9 215 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 OR5P3Q8WZ94 311 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 APOBEC3DQ96AK3 386 aaPredicted RBP0.92□□□□□ -2.26
YBX3-214ENST00000544501 CENPNQ96H22 339 aaPredicted RBP0.92□□□□□ -2.26
YBX3-214ENST00000544501 PYURFQ96I23 114 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 QKIQ96PU8 341 aaKnown RBP eCLIP0.92□□□□□ -2.26
YBX3-214ENST00000544501 TRIB3Q96RU7 358 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 ANP32EQ9BTT0 268 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 SHCBP1LQ9BZQ2 653 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 TXNIPQ9H3M7 391 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 PRORYQ9H606 182 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 TDRD3Q9H7E2 651 aaKnown RBP0.92□□□□□ -2.26
YBX3-214ENST00000544501 C12orf4Q9NQ89 552 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 FLVCR2Q9UPI3 526 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 ZNF443Q9Y2A4 671 aaPredicted RBP0.92□□□□□ -2.26
YBX3-214ENST00000544501 VPS13CQ709C8 3753 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 LRRC37AA6NMS7 1700 aa0.92□□□□□ -2.26
YBX3-214ENST00000544501 MUC2Q02817 5179 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 APCP25054 2843 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 ANKRD31Q8N7Z5 1873 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 SVILO95425 2214 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 A0A1W2PNM2 257 aa0.91□□□□□ -2.26
YBX3-214ENST00000544501 SDHAF1A6NFY7 115 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms