RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 RRNAD1Q96FB5 475 aaKnown RBP11.45□□□□□ -0.58
HCFC2-202ENST00000544223 MFFQ9GZY8 342 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 SLA2Q9H6Q3 261 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 IFT22Q9H7X7 185 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 U3KQ87 197 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 ZNF462Q96JM2 2506 aa11.45□□□□□ -0.58
HCFC2-202ENST00000544223 KIR2DS1A0A191URI9 304 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 POM121CA8CG34 1229 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 M0R233 179 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 DIRAS3O95661 229 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 GYPAP02724 150 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 PPP1CCP36873 323 aaKnown RBP11.44□□□□□ -0.58
HCFC2-202ENST00000544223 CD200P41217 278 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 KIR2DS4P43632 304 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 EDDM3BP56851 147 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 TMEM187Q14656 261 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 KIR2DS1Q14954 304 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 SURF2Q15527 256 aaPredicted RBP11.44□□□□□ -0.58
HCFC2-202ENST00000544223 TESK1Q15569 626 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 ZNF880Q6PDB4 577 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 CA5BP1Q8WTZ4 195 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 RSRP1Q9BUV0 290 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 MAB21L2Q9Y586 359 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 TRBV6-7A0A0A0MS04 114 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 A0A1B0GWJ7 208 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 B8ZZF3 427 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 LYNX1G3V0Z9 82 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 LYNX1P0DP58 116 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 KCNJ3P48549 501 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 SELENOVP59797 346 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 IAH1Q2TAA2 248 aaPredicted RBP11.44□□□□□ -0.58
HCFC2-202ENST00000544223 GGNBP1Q5YKI7 109 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 C11orf87Q6NUJ2 197 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 FAM90A1Q86YD7 464 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 OR8H3Q8N146 312 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 ZNF565Q8N9K5 539 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 SPERTQ8NA61 448 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 ZNF680Q8NEM1 530 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 LEAP2Q969E1 77 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 RNF126Q9BV68 326 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 GON7Q9BXV9 100 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 KCNS2Q9ULS6 477 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 RBM7Q9Y580 266 aaKnown RBP11.44□□□□□ -0.58
HCFC2-202ENST00000544223 MED13LQ71F56 2210 aa11.44□□□□□ -0.58
HCFC2-202ENST00000544223 MSGN1A6NI15 193 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 MPPED1O15442 326 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 TUSC2O75896 110 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 SPDEFO95238 335 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 IGLV2-14P01704 120 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 CD8AP01732 235 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 ZNF16P17020 682 aaPredicted RBP11.43□□□□□ -0.58
HCFC2-202ENST00000544223 TLE1Q04724 770 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 EXOSC2Q13868 293 aaKnown RBP11.43□□□□□ -0.58
HCFC2-202ENST00000544223 OR2B11Q5JQS5 317 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 ALKAL2Q6UX46 152 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 SLC38A6Q8IZM9 456 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 FAM216BQ8N7L0 139 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 OR52M1Q8NGK5 317 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 CCL13Q99616 98 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 COMMD9Q9P000 198 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 C3orf85A0A1B0GTC6 90 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 TUBG1P23258 451 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 FIP1L1Q6UN15 594 aaKnown RBP11.43□□□□□ -0.58
HCFC2-202ENST00000544223 ZNF808Q8N4W9 903 aaPredicted RBP11.43□□□□□ -0.58
HCFC2-202ENST00000544223 SLC35G3Q8N808 338 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 CCL17Q92583 94 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 TUBG2Q9NRH3 451 aa11.43□□□□□ -0.58
HCFC2-202ENST00000544223 RNF222A6NCQ9 220 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 PRSS44E7EML9 344 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 ERVH48-1M5A8F1 160 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 ZNF737O75373 536 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 LY6HO94772 140 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 HBZP02008 142 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 PSMB6P28072 239 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 TMEM268Q5VZI3 342 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 BTNL3Q6UXE8 466 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 Q6ZS49 121 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 H1FOOQ8IZA3 346 aaPredicted RBP11.42□□□□□ -0.58
HCFC2-202ENST00000544223 NUP37Q8NFH4 326 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 OR4A4PQ8NGN8 299 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 DCUN1D4Q92564 292 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 MSI2Q96DH6 328 aaKnown RBP11.42□□□□□ -0.58
HCFC2-202ENST00000544223 TRAF4Q9BUZ4 470 aaPredicted RBP11.42□□□□□ -0.58
HCFC2-202ENST00000544223 OR2W1Q9Y3N9 320 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 ZG16O60844 167 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 HLA-GP17693 338 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 LMO1P25800 156 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 CHRNB4P30926 498 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 S100A11P31949 105 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 ASCL1P50553 236 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 RPS23P62266 143 aaKnown RBP11.42□□□□□ -0.58
HCFC2-202ENST00000544223 VRK1Q99986 396 aaPredicted RBP11.42□□□□□ -0.58
HCFC2-202ENST00000544223 RAB18Q9NP72 206 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 COQ3Q9NZJ6 369 aa11.42□□□□□ -0.58
HCFC2-202ENST00000544223 LSM5Q9Y4Y9 91 aaKnown RBP11.42□□□□□ -0.58
HCFC2-202ENST00000544223 A0A1W2PPE3 182 aa11.41□□□□□ -0.58
HCFC2-202ENST00000544223 TMEM30CPA0ZSE6 113 aa11.41□□□□□ -0.58
HCFC2-202ENST00000544223 LHBP01229 141 aa11.41□□□□□ -0.58
HCFC2-202ENST00000544223 C3orf36Q3SXR2 165 aa11.41□□□□□ -0.58
HCFC2-202ENST00000544223 RIMS4Q9H426 269 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms