RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 DIAPH2-AS1Q14236 149 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 AWAT2Q6E213 333 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 RAB12Q6IQ22 244 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 OR2W3Q7Z3T1 314 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 DHRSXQ8N5I4 330 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 OR13C5Q8NGS8 318 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 CCDC107Q8WV48 283 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 RTN4IP1Q8WWV3 396 aaPredicted RBP10.38□□□□□ -0.75
RTN3-213ENST00000543552 MUL1Q969V5 352 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 EAF1Q96JC9 268 aaPredicted RBP10.38□□□□□ -0.75
RTN3-213ENST00000543552 OR14A2Q96R54 314 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 ETAA1Q9NY74 926 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 CNOT2Q9NZN8 540 aaKnown RBP10.38□□□□□ -0.75
RTN3-213ENST00000543552 CLEC2DQ9UHP7 191 aa10.38□□□□□ -0.75
RTN3-213ENST00000543552 TRAV8-7A0A075B6U6 113 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 TRBV5-7A0A0A0MS05 114 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 MYL12BO14950 172 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 MOSP00540 346 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 LALBAP00709 142 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 GLAP06280 429 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 CAPGP40121 348 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 MYCNOSP40205 109 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 THBS3P49746 956 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 ST3GAL4Q11206 333 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 DOC2BQ14184 412 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 LRRC36Q1X8D7 754 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 TEX38Q6PEX7 206 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 GLIPR1L1Q6UWM5 242 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 ZNF554Q86TJ5 538 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 MRPL41Q8IXM3 137 aaKnown RBP10.37□□□□□ -0.75
RTN3-213ENST00000543552 C8orf59Q8N0T1 100 aaPredicted RBP10.37□□□□□ -0.75
RTN3-213ENST00000543552 STPG2Q8N412 459 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 KLHL30-AS1Q8NEE0 82 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 PGLYRP3Q96LB9 341 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 NOL4LQ96MY1 436 aaPredicted RBP10.37□□□□□ -0.75
RTN3-213ENST00000543552 RASL11BQ9BPW5 248 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 UQCC2Q9BRT2 126 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 ABCG5Q9H222 651 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 ZNF581Q9P0T4 197 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 GHRLQ9UBU3 117 aa10.37□□□□□ -0.75
RTN3-213ENST00000543552 IGHV3-72A0A0B4J1Y9 119 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 A0A1W2PP11 408 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 C12orf77C9JDV5 145 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 CRTAPO75718 401 aaPredicted RBP10.36□□□□□ -0.75
RTN3-213ENST00000543552 GPR12P47775 334 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 ZNF137PP52743 207 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 RPS11P62280 158 aaKnown RBP eCLIP10.36□□□□□ -0.75
RTN3-213ENST00000543552 EGFEM1PQ0D2K5 195 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 SYT6Q5T7P8 510 aaPredicted RBP10.36□□□□□ -0.75
RTN3-213ENST00000543552 STEAP3Q658P3 488 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 UNQ9370/PRO34162Q6UXP9 181 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 SLC25A48Q6ZT89 311 aaKnown RBP10.36□□□□□ -0.75
RTN3-213ENST00000543552 C8orf86Q6ZUL3 223 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 ZNF695Q8IW36 515 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 Q8N6K4 173 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 ZFP41Q8N8Y5 198 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 ZNF485Q8NCK3 441 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 ST6GALNAC6Q969X2 333 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 ORAI1Q96D31 301 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 SELENOIQ9C0D9 397 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 CST11Q9H112 138 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 KCNIP1Q9NZI2 227 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 PEX16Q9Y5Y5 336 aa10.36□□□□□ -0.75
RTN3-213ENST00000543552 IGHV3-43A0A0B4J1X8 118 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 MAGEA13PA6NCF6 341 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 K7EIL1 84 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 HBZP02008 142 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 CD1AP06126 327 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 OR5H8P0DN80 308 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 IGHV3-43DP0DP04 118 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 MGMTP16455 207 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 CELP19835 753 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 FUT3P21217 361 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 WNT4P56705 351 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 ADARB1P78563 741 aaKnown RBP10.35□□□□□ -0.75
RTN3-213ENST00000543552 PNLIPRP3Q17RR3 467 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 CXorf66Q5JRM2 361 aaPredicted RBP10.35□□□□□ -0.75
RTN3-213ENST00000543552 ETV3LQ6ZN32 361 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 GAPTQ8N292 157 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 PRR18Q8N4B5 295 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 TMEM104Q8NE00 496 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 UBALD1Q8TB05 177 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 GGHQ92820 318 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 DERL3Q96Q80 235 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 VCXQ9H320 206 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 LINC00527Q9UJ94 153 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 ERGIC3Q9Y282 383 aa10.35□□□□□ -0.75
RTN3-213ENST00000543552 PNMA8CA0A1B0GUJ8 204 aa10.34□□□□□ -0.75
RTN3-213ENST00000543552 A0A1W2PPK0 400 aa10.34□□□□□ -0.75
RTN3-213ENST00000543552 PDCD6O75340 191 aa10.34□□□□□ -0.75
RTN3-213ENST00000543552 SC5DO75845 299 aa10.34□□□□□ -0.75
RTN3-213ENST00000543552 RGS11O94810 467 aa10.34□□□□□ -0.75
RTN3-213ENST00000543552 MAS1P04201 325 aa10.34□□□□□ -0.75
RTN3-213ENST00000543552 ELANEP08246 267 aa10.34□□□□□ -0.75
RTN3-213ENST00000543552 UBBP0CG47 229 aa10.34□□□□□ -0.75
RTN3-213ENST00000543552 VDAC1P21796 283 aa10.34□□□□□ -0.75
RTN3-213ENST00000543552 SOX6P35712 828 aa10.34□□□□□ -0.75
RTN3-213ENST00000543552 FOXE3Q13461 319 aa10.34□□□□□ -0.75
RTN3-213ENST00000543552 GPR50Q13585 617 aa10.34□□□□□ -0.75
RTN3-213ENST00000543552 RCN1Q15293 331 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms