RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 FUT3P21217 361 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 KITLGP21583 273 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 GDF1P27539 372 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 S100GP29377 79 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 RPL12P30050 165 aaKnown RBP4.96□□□□□ -1.62
XRCC4-206ENST00000542685 GPR6P46095 362 aaPredicted RBP4.96□□□□□ -1.62
XRCC4-206ENST00000542685 CSNK1A1P48729 337 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 RAB9AP51151 201 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 PIGPP57054 158 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 RAB38P57729 211 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 S100A10P60903 97 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 CKS1BP61024 79 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 RHOAP61586 193 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 DCAF7P61962 342 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 SIRPAP78324 504 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 TAF10Q12962 218 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 PPP1R1AQ13522 171 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 ZNF266Q14584 549 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 HIST3H3Q16695 136 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 FAM27D1Q5T7N8 215 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 Q6ZN92 141 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 LINC00346Q8IVM7 164 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 ZDHHC23Q8IYP9 409 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 CMTM8Q8IZV2 173 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 FER1L6-AS1Q8NA97 138 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 POC1AQ8NBT0 407 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 GPR32P1Q8NGA4 272 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 OR5AU1Q8NGC0 362 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 OR5AK3PQ8NH89 298 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 CMTM2Q8TAZ6 248 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 RNF133Q8WVZ7 376 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 OR5P2Q8WZ92 322 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 RAB1CQ92928 201 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 MAL2Q969L2 176 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 MRPL24Q96A35 216 aaKnown RBP4.96□□□□□ -1.62
XRCC4-206ENST00000542685 SEC22AQ96IW7 307 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 DERL3Q96Q80 235 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 GPR174Q9BXC1 333 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 CHST6Q9GZX3 395 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 CENPMQ9NSP4 180 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 FBXL17Q9UF56 701 aa4.96□□□□□ -1.62
XRCC4-206ENST00000542685 CASP8AP2Q9UKL3 1982 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 KMT2EQ8IZD2 1858 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 A0A0U1RQK1 487 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 LINC01553A4QN01 128 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 ANTXRLA6NF34 631 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 MSGN1A6NI15 193 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 ZNF727A8MUV8 499 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 EEF1E1-BLOC1S5C9J1V9 151 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 E5RGE8 158 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 ARPC3O15145 178 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 GPR137BO60478 399 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 SFT2D2O95562 160 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 IFNA1P01562 189 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 IGHG4P01861 327 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 HLA-HP01893 362 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 PRH1P02810 166 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 CATP04040 527 aaKnown RBP4.95□□□□□ -1.62
XRCC4-206ENST00000542685 HNRNPA1P09651 372 aaKnown RBP eCLIP4.95□□□□□ -1.62
XRCC4-206ENST00000542685 CEACAM1P13688 526 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 ATP1B2P14415 290 aaPredicted RBP4.95□□□□□ -1.62
XRCC4-206ENST00000542685 TUBG1P23258 451 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 EDNRAP25101 427 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 F2RP25116 425 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 IL12BP29460 328 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 S100A7P31151 101 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 FCGR2CP31995 323 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 SOAT1P35610 550 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 PRLHRP49683 370 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 RPS11P62280 158 aaKnown RBP eCLIP4.95□□□□□ -1.62
XRCC4-206ENST00000542685 CSNK2A1P68400 391 aaPredicted RBP4.95□□□□□ -1.62
XRCC4-206ENST00000542685 MMDQ15546 238 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 TMEM249Q2WGJ8 235 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 ARHGAP11BQ3KRB8 267 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 KRTAP27-1Q3LI81 207 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 Q499Y3 187 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 TCEAL5Q5H9L2 206 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 C12orf54Q6X4T0 127 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 TMEM64Q6YI46 380 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 ZNF329Q86UD4 541 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 ZNF584Q8IVC4 421 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 MUC15Q8N387 334 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 CLDN19Q8N6F1 224 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 NEXN-AS1Q8NBZ9 246 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 KLHDC9Q8NEP7 349 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 CSNK2A3Q8NEV1 391 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 TSTD1Q8NFU3 115 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 OR10H4Q8NGA5 316 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 OR4K1Q8NGD4 311 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 OR5A1Q8NGJ0 315 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 SKA2Q8WVK7 121 aaPredicted RBP4.95□□□□□ -1.62
XRCC4-206ENST00000542685 SDSLQ96GA7 329 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 GMPPAQ96IJ6 420 aaPredicted RBP4.95□□□□□ -1.62
XRCC4-206ENST00000542685 EBPLQ9BY08 206 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 PLA2G12AQ9BZM1 189 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 CST11Q9H112 138 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 METTL7AQ9H8H3 244 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 SDF2L1Q9HCN8 221 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 BPIFA1Q9NP55 256 aa4.95□□□□□ -1.62
XRCC4-206ENST00000542685 HINT3Q9NQE9 182 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms