RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 MMP26Q9NRE1 261 aa15.57■□□□□ 0.08
TNFRSF1A-213ENST00000540022 TAS2R8Q9NYW2 309 aa15.57■□□□□ 0.08
TNFRSF1A-213ENST00000540022 TAS2R3Q9NYW6 316 aa15.57■□□□□ 0.08
TNFRSF1A-213ENST00000540022 ZNF107Q9UII5 783 aaPredicted RBP15.57■□□□□ 0.08
TNFRSF1A-213ENST00000540022 POLR3KQ9Y2Y1 108 aaPredicted RBP15.57■□□□□ 0.08
TNFRSF1A-213ENST00000540022 FN1P02751 2386 aaKnown RBP15.57■□□□□ 0.08
TNFRSF1A-213ENST00000540022 MALRD1Q5VYJ5 2156 aa15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 YLPM1P49750 1951 aaKnown RBP15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 IGKV1-6A0A0C4DH72 117 aa15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 KBTBD11-OT1A0A1B0GTJ5 212 aa15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 ZNF729A6NN14 1252 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 ZNF736B4DX44 427 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 HBZP02008 142 aa15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 CSF1P09603 554 aa15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 ZNF728P0DKX0 622 aa15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 DLX6P56179 175 aa15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 ERVFRD-1P60508 538 aa15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 KLF9Q13886 244 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 HERPUD1Q15011 391 aa15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 IGSF11Q5DX21 431 aa15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 ZNF57Q68EA5 555 aaPredicted RBP15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 OR5AP2Q8NGF4 316 aa15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 KIRREL1Q96J84 757 aa15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 OPN4Q9UHM6 478 aa15.56■□□□□ 0.08
TNFRSF1A-213ENST00000540022 LINC00854A0A1B0GVQ3 168 aa15.55■□□□□ 0.08
TNFRSF1A-213ENST00000540022 NPIPB11E5RHQ5 1161 aa15.55■□□□□ 0.08
TNFRSF1A-213ENST00000540022 ENSAO43768 121 aaKnown RBP15.55■□□□□ 0.08
TNFRSF1A-213ENST00000540022 LIPFP07098 398 aa15.55■□□□□ 0.08
TNFRSF1A-213ENST00000540022 OMGP23515 440 aa15.55■□□□□ 0.08
TNFRSF1A-213ENST00000540022 HRH1P35367 487 aa15.55■□□□□ 0.08
TNFRSF1A-213ENST00000540022 TAS2R19P59542 299 aa15.55■□□□□ 0.08
TNFRSF1A-213ENST00000540022 CHRFAM7AQ494W8 412 aa15.55■□□□□ 0.08
TNFRSF1A-213ENST00000540022 C11orf42Q8N5U0 333 aa15.55■□□□□ 0.08
TNFRSF1A-213ENST00000540022 OR4D10Q8NGI6 311 aa15.55■□□□□ 0.08
TNFRSF1A-213ENST00000540022 OR4A4PQ8NGN8 299 aa15.55■□□□□ 0.08
TNFRSF1A-213ENST00000540022 IL1F10Q8WWZ1 152 aa15.55■□□□□ 0.08
TNFRSF1A-213ENST00000540022 LINC00574Q9H8X3 128 aa15.55■□□□□ 0.08
TNFRSF1A-213ENST00000540022 IGHV2-70DA0A0C4DH43 119 aa15.54■□□□□ 0.08
TNFRSF1A-213ENST00000540022 M0QYG6 137 aa15.54■□□□□ 0.08
TNFRSF1A-213ENST00000540022 SPINT2O43291 252 aa15.54■□□□□ 0.08
TNFRSF1A-213ENST00000540022 MMP23AO75900 390 aa15.54■□□□□ 0.08
TNFRSF1A-213ENST00000540022 PMP2P02689 132 aa15.54■□□□□ 0.08
TNFRSF1A-213ENST00000540022 CD74P04233 296 aa15.54■□□□□ 0.08
TNFRSF1A-213ENST00000540022 RFX2P48378 723 aa15.54■□□□□ 0.08
TNFRSF1A-213ENST00000540022 INPP1P49441 399 aa15.54■□□□□ 0.08
TNFRSF1A-213ENST00000540022 ARPC4P59998 168 aa15.54■□□□□ 0.08
TNFRSF1A-213ENST00000540022 STEAP3Q658P3 488 aa15.54■□□□□ 0.08
TNFRSF1A-213ENST00000540022 STEAP1BQ6NZ63 245 aa15.54■□□□□ 0.08
TNFRSF1A-213ENST00000540022 CABLES2Q9BTV7 478 aa15.54■□□□□ 0.08
TNFRSF1A-213ENST00000540022 GAL3ST2Q9H3Q3 398 aa15.54■□□□□ 0.08
TNFRSF1A-213ENST00000540022 C17orf98A8MV24 154 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 B4DSR2 109 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 TAS2R46P59540 309 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 CDK10Q15131 360 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 LTC4SQ16873 150 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 FAM53AQ6NSI3 398 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 FAAP20Q6NZ36 180 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 Q71RC1 249 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 OR5H2Q8NGV7 314 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 GALMQ96C23 342 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 TINAGL1Q9GZM7 467 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 ANK3Q12955 4377 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 HIVEP2P31629 2446 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 A0A1W2PPH5 198 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 F2RL2O00254 374 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 SDCBPO00560 298 aaPredicted RBP15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 BET1O15155 118 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 PLA2G10O15496 165 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 RAB3DO95716 219 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 MSMBP08118 114 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 AKAIN1P0CW23 69 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 OR3A3P47888 321 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 AP3S2P59780 193 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 ARF6P62330 175 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 TMEM249Q2WGJ8 235 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 RNASE10Q5GAN6 216 aaKnown RBP15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 PRAMEF5Q5TYX0 476 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 C16orf87Q6PH81 154 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 CLEC9AQ6UXN8 241 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 HEPN1Q6WQI6 88 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 OVCH2Q7RTZ1 564 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 OR4C16Q8NGL9 310 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 DMRTB1Q96MA1 342 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 IDI2-AS1Q9NZ38 188 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 OR1A1Q9P1Q5 309 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 ONECUT1Q9UBC0 465 aa15.53■□□□□ 0.08
TNFRSF1A-213ENST00000540022 IGHV3-43A0A0B4J1X8 118 aa15.52■□□□□ 0.07
TNFRSF1A-213ENST00000540022 LY6G6DO95868 133 aa15.52■□□□□ 0.07
TNFRSF1A-213ENST00000540022 IGHV3-43DP0DP04 118 aa15.52■□□□□ 0.07
TNFRSF1A-213ENST00000540022 IGHV4-31P0DP07 118 aa15.52■□□□□ 0.07
TNFRSF1A-213ENST00000540022 TBPP20226 339 aa15.52■□□□□ 0.07
TNFRSF1A-213ENST00000540022 DYRK1AQ13627 763 aa15.52■□□□□ 0.07
TNFRSF1A-213ENST00000540022 ACTBL2Q562R1 376 aa15.52■□□□□ 0.07
TNFRSF1A-213ENST00000540022 VAX1Q5SQQ9 334 aa15.52■□□□□ 0.07
TNFRSF1A-213ENST00000540022 Q8N7P7 452 aa15.52■□□□□ 0.07
TNFRSF1A-213ENST00000540022 LINC01356Q8N9X3 169 aa15.52■□□□□ 0.07
TNFRSF1A-213ENST00000540022 OR52L2PQ8NGH6 319 aa15.52■□□□□ 0.07
TNFRSF1A-213ENST00000540022 MSI2Q96DH6 328 aaKnown RBP15.52■□□□□ 0.07
TNFRSF1A-213ENST00000540022 HRASLSQ9HDD0 168 aa15.52■□□□□ 0.07
TNFRSF1A-213ENST00000540022 NECAP2Q9NVZ3 263 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms