RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 ARHGEF17Q96PE2 2063 aaPredicted RBP5.66□□□□□ -1.5
LSAMP-207ENST00000539563 GZMMP51124 257 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 IZUMO4Q1ZYL8 232 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 MIXL1Q9H2W2 232 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 PPIAL4EA0A075B759 164 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 PPIAL4DF5H284 164 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 AP4M1O00189 453 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 CCL21O00585 134 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 DXOO77932 396 aaKnown RBP5.66□□□□□ -1.5
LSAMP-207ENST00000539563 IGF2P01344 180 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 PPIAL4FP0DN26 164 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 ID1P41134 155 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 EWSR1Q01844 656 aaKnown RBP eCLIP5.66□□□□□ -1.5
LSAMP-207ENST00000539563 COL10A1Q03692 680 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 OR4P4Q8NGL7 312 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 DYNLRB2Q8TF09 96 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 PPIAL4AQ9Y536 164 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 HELTA6NFD8 242 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 M0R2Z0 102 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 ISG15P05161 165 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 IGHV4-34P06331 123 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 ASAH2BP0C7U1 165 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 PRDX2P32119 198 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 TMEM50BP56557 158 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 RBM11P57052 281 aaKnown RBP5.66□□□□□ -1.5
LSAMP-207ENST00000539563 TMPRSS3P57727 454 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 CEACAM21Q3KPI0 293 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 OR10AC1Q8NH08 325 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 OR4X1Q8NH49 305 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 CCL28Q9NRJ3 127 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 CLN8Q9UBY8 286 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 ZDHHC8Q9ULC8 765 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 MFSD2BA6NFX1 497 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 ISLRO14498 428 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 CRISP2P16562 243 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 ERVS71-1P61550 626 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 HOXA4Q00056 320 aaPredicted RBP5.66□□□□□ -1.5
LSAMP-207ENST00000539563 C16orf82Q7Z2V1 217 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 TMEM116Q8NCL8 245 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 TINAGQ9UJW2 476 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 IGHV3-13P01766 116 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 IGHV3-7P01780 117 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 VAX1Q5SQQ9 334 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 DGAT2L7PQ6IED9 249 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 CALHM1Q8IU99 346 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 UFC1Q9Y3C8 167 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 PRR33A8MZF0 331 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 J3QR06 171 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 HYAL3O43820 417 aaPredicted RBP5.66□□□□□ -1.5
LSAMP-207ENST00000539563 SPINK4O60575 86 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 PTP4A3O75365 173 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 FSTP19883 344 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 COL8A1P27658 744 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 MC5RP33032 325 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 SULT1A1P50225 295 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 P2RY6Q15077 328 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 MYOZ3Q8TDC0 251 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 ADAT3Q96EY9 351 aaPredicted RBP5.66□□□□□ -1.5
LSAMP-207ENST00000539563 GHITMQ9H3K2 345 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 OR51B2Q9Y5P1 312 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 LIPGQ9Y5X9 500 aa5.66□□□□□ -1.5
LSAMP-207ENST00000539563 TRAV8-7A0A075B6U6 113 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 K7N7A8 449 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 AESQ08117 197 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 TOMM20LQ6UXN7 152 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 ZNF645Q8N7E2 425 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 ZNF519Q8TB69 540 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 IFT22Q9H7X7 185 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 KIF26BQ2KJY2 2108 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 FAM157AC9JC47 383 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 CORTO00230 105 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 RPL7P18124 248 aaKnown RBP5.65□□□□□ -1.5
LSAMP-207ENST00000539563 GCSHP23434 173 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 UCP2P55851 309 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 ZNF345Q14585 488 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 CEBPEQ15744 281 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 ZAR1Q86SH2 424 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 GCSAMQ8N6F7 178 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 OR11H7Q8NGC8 314 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 OR2J1Q9GZK6 312 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 WIPI2Q9Y4P8 454 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 MFNGO00587 321 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 HLA-DRB5Q30154 266 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 TEX30Q5JUR7 227 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 TSPO2Q5TGU0 170 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 CLEC2AQ6UVW9 174 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 OR8I2Q8N0Y5 310 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 FGF11Q92914 225 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 TMUB1Q9BVT8 246 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 NPVFQ9HCQ7 196 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 PARP11Q9NR21 331 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 MDC1Q14676 2089 aaKnown RBP5.65□□□□□ -1.5
LSAMP-207ENST00000539563 M0R143 59 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 G6PCP35575 357 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 CAMPP49913 170 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 RPL31P62899 125 aaKnown RBP5.65□□□□□ -1.5
LSAMP-207ENST00000539563 VWA1Q6PCB0 445 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 ST6GAL2Q96JF0 529 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 DCAF16Q9NXF7 216 aa5.65□□□□□ -1.5
LSAMP-207ENST00000539563 IGHV3OR15-7A0A075B7D8 119 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms